Results 71 to 80 of about 551,943 (360)

Molecular Phylogenetics and Mitochondrial Evolution

open access: yesLife, 2021
The myth of a “typical” mitochondrial genome (mtDNA) is a rock-hard belief in the field of genetics, at least for the animal kingdom [...]
Andrea Luchetti, Federico Plazzi
doaj   +1 more source

Structural Phylogenetics with Confidence

open access: yesMolecular biology and evolution, 2020
For evaluating the deepest evolutionary relationships among proteins, sequence similarity is too low for application of sequence-based homology search or phylogenetic methods.
Ashar J. Malik   +2 more
semanticscholar   +1 more source

Protein O‐glycosylation in the Bacteroidota phylum

open access: yesFEBS Open Bio, EarlyView.
Species of the Bacteroidota phylum exhibit a unique O‐glycosylation system. It modifies noncytoplasmic proteins on a specific amino acid motif with a shared glycan core but a species‐specific outer glycan. A locus of multiple glycosyltransferases responsible for the synthesis of the outer glycan has been identified.
Lonneke Hoffmanns   +2 more
wiley   +1 more source

The dawn of relaxed phylogenetics.

open access: yesPLoS Biology, 2023
Tracing the history of evolution across time is a primary goal of evolutionary biology. The 2006 publication of a landmark study on relaxed phylogenetics in PLOS Biology enabled biologists to shed light on evolution's tempo and shaped the future of ...
Jacob L Steenwyk, Antonis Rokas
doaj   +1 more source

Tropical Principal Component Analysis and Its Application to Phylogenetics [PDF]

open access: yesBulletin of Mathematical Biology, 2017
Principal component analysis is a widely used method for the dimensionality reduction of a given data set in a high-dimensional Euclidean space. Here we define and analyze two analogues of principal component analysis in the setting of tropical geometry.
R. Yoshida, Leon Zhang, Xu Zhang
semanticscholar   +1 more source

Crinoid phylogeny: a preliminary analysis (Echinodermata: Crinoidea) [PDF]

open access: yes, 2004
We describe the first molecular and morphological analysis of extant crinoid high-level inter-relationships. Nuclear and mitochondrial gene sequences and a cladistically coded matrix of 30 morphological characters are presented, and analysed by ...
Ameziane, N.   +3 more
core   +2 more sources

Actin dynamics controlled by IqgC, a RasGAP at the crossroads between the IQGAP and fungal GAP1 families

open access: yesFEBS Open Bio, EarlyView.
IqgC is a RasGAP from Dictyostelium discoideum. IqgC binds RasG via its RasGAP domain and deactivates it on macroendocytic cups, thereby suppressing the uptake of fluid and particles. IqgC has a positive effect on cell‐substratum adhesion, and its RGCt domain is required for recruitment to ventral foci.
Vedrana Filić   +3 more
wiley   +1 more source

A Non-Destructive Method, Micro-CT, Supports the Identification of Three New Casmara Species from Sumatra and Taiwan (Lepidoptera: Ashinagidae)

open access: yesInsects
Insects exhibit diverse ecological characteristics, but species identification is challenging due to high morphological similarity. Traditional methods require genitalia dissection, which damages specimens and flattens three-dimensional structures ...
In-Won Jeong, Sora Kim, John B. Heppner
doaj   +1 more source

DNA barcodes reveal population-dependent cryptic diversity and various cases of sympatry of Korean leptonetid spiders (Araneae: Leptonetidae)

open access: yesScientific Reports, 2022
Leptonetidae are tiny, rarely encountered spiders that mainly inhabit moist environments, such as caves, leaf litter, and rock piles. Because they are microhabitat specialists, most leptonetid species have short-range endemism, and rarely occur in ...
Jong-Hwa Oh, Sora Kim, Seunghwan Lee
doaj   +1 more source

Phylogenetic Insights on Patterns of HIV-1 Spread and the Design of Epidemic Control Measures

open access: yesViruses, 2022
Phylogenetics provides a unique structural framework to track the spread of viral diseases, such as HIV-1 (human immunodeficiency virus type 1), the causative agent of AIDS (acquired immunodeficiency syndrome) [...]
Bluma G. Brenner
doaj   +1 more source

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