Results 91 to 100 of about 27,719 (254)

Universal and Lineage‐Specific Patterns in the Distribution of ECOD Domain Homology Groups Across Superkingdoms

Proteins: Structure, Function, and Bioinformatics, EarlyView.
ABSTRACT Proteins are built from modular domains that serve as fundamental units of structure and evolution. While individual domains have been extensively cataloged, their collective distribution across the lineages of life has remained poorly resolved.
Rui Guo, Jimin Pei, Jing Zhang, Qian Cong, Nick V. Grishin, R. Dustin Schaeffer   +5 more
wiley   +1 more source

A phylogenomic profile of globins [PDF]

BMC Evolutionary Biology, 2006
AbstractBackgroundGlobins occur in all three kingdoms of life: they can be classified into single-domain globins and chimeric globins. The latter comprise the flavohemoglobins with a C-terminal FAD-binding domain and the gene-regulating globin coupled sensors, with variable C-terminal domains.
Vinogradov, S. N., Hoogewijs, D., Bailly, X., Arredondo-Peter, R., Gough, Julian J T, Dewilde, S., Moens, L., Vanfleteren, J. R.   +7 more
openaire   +7 more sources

Genomic variations define divergence of water/wildlife-associated Campylobacter jejuni niche specialists from common clonal complexes [PDF]

, 2011
Although the major food-borne pathogen Campylobacter jejuni has been isolated from diverse animal, human and environmental sources, our knowledge of genomic diversity in C.
Ashelford, KE, Birtles, RJ, Dorrell, N, French, NP, Gould, KA, Hall, N, Hepworth, PJ, Hinds, J, Leatherbarrow, H, Mendonca, C, Wigley, P, Williams, NJ, Winstanley, C, Witney, AA, Wren, BW   +14 more
core   +2 more sources

The predatory behavior of ants: an impressive panoply of morphological adaptations

Insect Science, EarlyView.
This review focuses on predation in ants, showing the wide diversity of cases from solitary foraging to group hunting tactics, as well as the evolution of mandible shape frequently adapted to capture specific prey. Although most ants are generalist feeders, finding their sugary substances directly on plants or indirectly via sap‐sucking insects, some ...
Alain Dejean, Xim Cerdá, Jérôme Orivel, Frédéric Azémar, Alexander L. Wild, Bruno Corbara, Axel Touchard   +6 more
wiley   +1 more source

Taxonomic description of cyanobacteria from extreme habitats through genome-based classification

Frontiers in Microbiology
IntroductionCyanobacteria form a morphologically and phylogenetically diverse group of oxygenic phototrophic bacteria inhabiting a wide range of environments, including extreme habitats such as hot springs and volcanic steam vents.
Edi Sudianto, Maximillian D. Shlafstein, Benoit Durieu, Marie Harmel, Luc Cornet, Jimmy H. Saw   +5 more
doaj   +1 more source

Museomics Deciphers the Phylogeographic Differentiation and Conservation Status of a Montane Pheasant

Integrative Zoology, EarlyView.
Museum specimens provide a rich source of historical DNA, enabling insights into phylogenetic relationships and demographic history of the endangered Koklass Pheasant. Our findings uncovered a previously unrecognized population in Guizhou province and highlighted elevated extinction risk in populations from Anhui province and Southern China, informing ...
Zhiyong Jiang, Yalin Cheng, Shuai Zhang, Wenqing Zang, Peng He, Dezhi Zhang, Jinjuan Mei, Peng Cui, Yanhua Qu, Hailong Wu   +9 more
wiley   +1 more source

Genome-wide systematic survey and analysis of the RNA helicase gene family and their response to abiotic stress in sweetpotato

BMC Plant Biology
Sweetpotato (Ipomoea batatas (L.) Lam.) holds a crucial position as one of the staple foods globally, however, its yields are frequently impacted by environmental stresses.
Fangfang Mu, Hao Zheng, Qiaorui Zhao, Mingku Zhu, Tingting Dong, Lei Kai, Zongyun Li   +6 more
doaj   +1 more source

Cenozoic Tectonics Ignite Mitochondrial Codon Innovations Propelling Canid Body Size Evolution and Transcontinental Radiations

Integrative Zoology, EarlyView.
We decode mitochondrial genomes across all extant canids, revealing lineage‐specific codon optimization driven by altitude, predation, and body size. A tripartite framework integrates geological events, metabolic constraints, and adaptive radiation to explain carnivore evolution.
Xiaoyang Wu, Xibao Wang, Yongquan Shang, Yao Chen, Haotian Cai, Tian Xia, Qinguo Wei, Weilai Sha, Honghai Zhang   +8 more
wiley   +1 more source

Phylogenomics of Prokaryotic Ribosomal Proteins

PLoS ONE, 2011
Archaeal and bacterial ribosomes contain more than 50 proteins, including 34 that are universally conserved in the three domains of cellular life (bacteria, archaea, and eukaryotes). Despite the high sequence conservation, annotation of ribosomal (r-) protein genes is often difficult because of their short lengths and biased sequence composition.
Natalya Yutin, Pere Puigbò, Eugene V Koonin, Yuri I Wolf   +3 more
openaire   +5 more sources

Refining the Vertebrate Mitochondrial 12S rRNA Secondary Structure by Comparative Analysis

Integrative Zoology, EarlyView.
This flowchart outlines the comprehensive workflow of the study, integrating diverse bioinformatics tools (e.g., NCBI2GO, SSU‐align, bpRNA) and their sequential interactions. Key steps, such as data preprocessing, structural prediction, and evolutionary analysis, are depicted with their respective outputs (e.g., standardized records, consensus ...
Fengxia Li, Gengyun Niu, Renzeng Du, Kun Wan, David Roy Smith, Meicai Wei, Haihe Shi   +6 more
wiley   +1 more source