Results 81 to 90 of about 81,771 (356)

Complete plastid genome of Rhododendron griersonianum, a critically endangered plant with extremely small populations (PSESP) from southwest China

Mitochondrial DNA. Part B. Resources, 2020
The complete plastid genome of Rhododendron griersonianum, a critically endangered plant species with extremely small populations, was obtained using Illumina HiSeq X Ten and ONT PromethION sequencing.
Detuan Liu, Chaonan Fu, Lingjuan Yin, Yongpeng Ma   +3 more
doaj   +1 more source

Plastid: nucleotide-resolution analysis of next-generation sequencing and genomics data

BMC Genomics, 2016
Next-generation sequencing (NGS) informs many biological questions with unprecedented depth and nucleotide resolution. These assays have created a need for analytical tools that enable users to manipulate data nucleotide-by-nucleotide robustly and easily.
Joshua G. Dunn, J. Weissman
semanticscholar   +1 more source

First genome sequence of a European Alternaria brassicae isolate and genes involved in early development of alternaria leaf spot on Brassica juncea

Pest Management Science, EarlyView.
This article reports the first genome sequence of a UK Alternaria brassicae isolate. Dual RNA‐sequencing profiling of A. brassicae‐infected Brassica juncea leaves identified differentially expressed genes involved in pathogenicity and host response pathways in moderately resistant Sej‐2 (2) and moderately susceptible Pusa Jaikisan cultivars.
Kevin M. King, Graham McLaughlin, Chinthani S. Karandeni Dewage, Zedi Gao, David J. Hughes, Jonathan S. West, Henrik U. Stotz   +6 more
wiley   +1 more source

Seed Dormancy Involves a Transcriptional Program That Supports Early Plastid Functionality during Imbibition

Plants, 2018
Red rice fully dormant seeds do not germinate even under favorable germination conditions. In several species, including rice, seed dormancy can be removed by dry-afterripening (warm storage); thus, dormant and non-dormant seeds can be compared for the ...
Alberto Gianinetti, Franca Finocchiaro, Paolo Bagnaresi, Antonella Zechini, Primetta Faccioli, Luigi Cattivelli, Giampiero Valè, Chiara Biselli   +7 more
doaj   +1 more source

Characterization of the complete plastid genome of Astelia australiana (J. H. Willis) L. B. Moore (Asteliaceae, Asparagales)

Mitochondrial DNA. Part B. Resources, 2020
Astelia australiana is a robust understorey plant with a highly restricted distribution in southeastern Australia. Here we report its complete plastid genome. The genome was 157,943 bp in length and comprises a pair of inverted repeats (IRs) of 27,028 bp
Michael D. Amor, Gareth D. Holmes, Elizabeth A. James   +2 more
doaj   +1 more source

Dismantling the genus Tarenna (Rubiaceae: Pavetteae) in Africa and Madagascar, with the description of three new genera

TAXON, EarlyView.
Abstract As presently circumscribed, the Paleotropical genus Tarenna, belonging to the tribe Pavetteae (Rubiaceae), comprises about 200 species and has its centres of diversity in tropical Asia and Africa. Previous molecular phylogenetic studies of the tribe revealed the polyphyly of Tarenna, suggesting that the genus needs to be recircumscribed ...
Petra De Block, Sylvain G. Razafimandimbison, Franck Rakotonasolo, Steven B. Janssens   +3 more
wiley   +1 more source

Phylogeny and historical biogeography of the Pachira sensu lato clade (Bombacoideae, Malvaceae) with a new infrageneric classification

TAXON, EarlyView.
Abstract We explore phylogenetic relationships within the Pachira sensu lato clade (Bombacoideae, Malvaceae), test the monophyly of the genera Eriotheca and Pachira, and investigate their biogeographic history. The Pachira s.l. clade comprises ca. 72 species that traditionally have been placed in Eriotheca and Pachira. We sampled ca. 79% of its species
Vania Nobuko Yoshikawa, Júlia Sousa Siqueira, William S. Alverson, Rafaela Passos Camargo, Alexandre Wagner Silva Hilsdorf, Letícia Rafaela de Morais, Flávia Fonseca Pezzini, Marília Cristina Duarte   +7 more
wiley   +1 more source

Phylogeny, species delimitation and machine learning bridge the gap between DNA sequences and morphology in the lichen genus Arctomia (Arctomiaceae, Ascomycota)

TAXON, EarlyView.
Abstract This study investigates species boundaries in the lichen genus Arctomia (Arctomiaceae, Ascomycota) using an integrative approach combining molecular phylogenetics, full Bayesian population delimitation, heuristic and model‐based species delimitation, and supervised machine learning applied to morphological data.
Stefan Ekman, Måns Svensson, Martin Westberg   +2 more
wiley   +1 more source

The core autophagy machinery is not required for chloroplast singlet oxygen-mediated cell death in the Arabidopsis thaliana plastid ferrochelatase two mutant [PDF]

, 2021
Matthew D. Lemke, Karen E. Fisher, Marta A. Kozlowska, David W. Tano, Jesse D. Woodson   +4 more
openalex   +1 more source

Plastid intramembrane proteolysis

Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2015
Progress in the field of regulated intramembrane proteolysis (RIP) in recent years has not surpassed plant biology. Nevertheless, reports on RIP in plants, and especially in chloroplasts, are still scarce. Of the four different families of intramembrane proteases, only two have been linked to chloroplasts so far, rhomboids and site-2 proteases (S2Ps ...
openaire   +2 more sources