Results 91 to 100 of about 12,174 (271)

Complete plastome assemblies from a panel of 13 diverse potato taxa.

PLoS ONE, 2020
The chloroplasts are a crucial part of photosynthesizing plant cells and are extensively utilized in phylogenetic studies mainly due to their maternal inheritance.
Sai Reddy Achakkagari, Maria Kyriakidou, Helen H Tai, Noelle L Anglin, David Ellis, Martina V Strömvik   +5 more
doaj   +1 more source

Phylogenomic evidence reveals non‐monophyly of Paepalanthoideae (Eriocaulaceae) and challenges the broad concept of Paepalanthus

TAXON, EarlyView.
Abstract Eriocaulaceae is a pantropical family of approximately 1200 species across 18 genera, with its highest diversity in the Neotropical region. Traditionally, the family has been divided into two subfamilies, Eriocauloideae and Paepalanthoideae, based on floral traits. Here, we use target‐capture sequencing of nuclear markers to test the monophyly
Caroline Oliveira Andrino, Rafael Gomes Barbosa‐Silva, Carolina Siniscalchi, Paulo César Baleeiro, Fabiane Nepomuceno da Costa, Leeann Dabydeen, Rafaela Missagia, Richard W. Jobson, Gregory M. Plunkett, Paulo Takeo Sano, Marcelo Fragomeni Simon, Benjamin Torke, Pedro Lage Viana   +12 more
wiley   +1 more source

The floral transcriptomes of four bamboo species (Bambusoideae; Poaceae): support for common ancestry among woody bamboos [PDF]

, 2016
Background Next-generation sequencing now allows for total RNA extracts to be sequenced in non-model organisms such as bamboos, an economically and ecologically important group of grasses.
Duvall, Melvin R., Ruiz-Sanchez, Eduardo, Wysocki, William P., Yin, Yanbin   +3 more
core   +3 more sources

The complete plastome of Bennettiodendron brevipes [PDF]

Mitochondrial DNA Part B, 2019
Bennettiodendron brevipes, which is only distributed in China, is a genus of the family Salicaceae. In this study, we assembled the complete chloroplast genome of B. brevipes using Illumina paired-end sequencing data. The complete chloroplast genome sequence of B. brevipes is 158,605 bp in size.
Deyan Wang, Xiaoting Xu, Huanhuan Liu, Mengmeng Li, Yang Chen   +4 more
openaire   +3 more sources

The complete plastome sequences of Mangifera indica L. (Anacardiaceae)

Mitochondrial DNA. Part B. Resources, 2017
In this study, we determined the complete plastome sequence of Mangifera indica L. (Anacardiaceae) (NCBI acc. no. KX871231). The complete plastome is 157,780 bp in length, and consists of a large single copy of 86,673 bp and a small single copy of 18,349 
Sangjin Jo, Hoe-Won Kim, Young-Kee Kim, Jung-Yeon Sohn, Se-Hwan Cheon, Ki-Joong Kim   +5 more
doaj   +1 more source

A densely sampled nuclear phylogenomic analysis of the coryphoid palms (Arecaceae: Coryphoideae)

TAXON, EarlyView.
Abstract The palm family (Arecaceae) has a rich history of phylogenetic research, including several recent phylogenomic studies. However, densely sampled phylogenomic datasets for larger palm clades – such as subfamilies – are still few in number. We used target sequence capture to obtain data for 971 nuclear genes across 421 (ca.
Oscar Wrisberg, Peter Petoe, Paola de Lima Ferreira, Christine D. Bacon, Anders S. Barfod, Sidonie Bellot, Ángela Cano, Thomas L.P. Couvreur, John Dransfield, Andrew Henderson, Fred W. Stauffer, William J. Baker, Wolf L. Eiserhardt   +12 more
wiley   +1 more source

Asymmetric somatic plant hybridization : status and applications [PDF]

, 2013
To create asymmetric somatic hybrids, the genome of the so-called donor protoplast is fragmented prior to protoplast fusion. As a result, only a limited amount of the donor genome is transferred to the fusion product.
Deryckere, Dieter, Eeckhaut, Tom, Lakshmanan, Prabhu Shankar, Van Bockstaele, Erik, Van Huylenbroeck, Johan   +4 more
core   +2 more sources

Scaling Up Species Delimitation From DNA Barcodes to Whole Organelle Genomes: Strong Evidence for Discordance Among Genes and Methods for the Red Alga Dasyclonium

Molecular Ecology Resources, EarlyView.
ABSTRACT Molecular sequence data have become a ubiquitous tool for delimiting species and are particularly important in organisms where morphological traits are not informative about species boundaries. A range of statistical methods have been developed to derive species limits from molecular data, for example, by quantifying changes in branching ...
Heroen Verbruggen, Kavitha Uthanumallian, Felix Powrie, Tara Jalali, Chiela Cremen, Maren Preuss, Sebastian Duchene, Pilar Diaz‐Tapia   +7 more
wiley   +1 more source

The cytonuclear interactions during grapevine domestication

Journal of Integrative Plant Biology, EarlyView.
Analysis of the grapevine pan‐mitochondrial genome reveals extensive structural variation, and shows that nuclear‐mitochondrial segments promote cytonuclear interaction during grapevine domestication, offering insights into the effect of cytonuclear interactions on plant evolution, genetics, and breeding.
Ting Hou, Yanshuai Xu, Yang Dong, Jin Yao, Tianhao Zhang, Lianzhu Zhou, Xiangnian Su, Yi Zhang, Yingchun Zhang, Cheng Chen, Xiaoya Shi, Yuting Liu, Jiacui Li, Mengrui Du, Xinyue Fang, Sheng Yan, Sifan Yang, Wenrui Wang, Zhuyifu Chen, Siqi Qiao, Bilal Ahmad, Xiaodong Xu, Yanling Peng, Hua Xiao, Zhongxin Jin, Xiangpeng Leng, Cong Tan, Ling Tian, Chaochao Li, Yongfeng Zhou   +29 more
wiley   +1 more source

The plastid genome of Vanillon (Vanilla pompona, Orchidaceae) [PDF]

, 2017
Peer ...
Amiryousefi, Ali, Hyvönen, Jaakko, Poczai, Péter   +2 more
core   +1 more source