Results 111 to 120 of about 15,209 (262)

PlantCTCIP: Chromatin Interaction Prediction Using Convolutional Neural Network and Transformer in Plants

open access: yesPlant Biotechnology Journal, EarlyView.
ABSTRACT Chromatin interactions establish spatial proximity between distant regulatory elements and their target genes, significantly influencing gene expression, and phenotypic traits. In this study, we present a plant chromatin interaction prediction model called PlantCTCIP based on Convolutional Neural Networks and Transformer.
Zhenye Wang   +14 more
wiley   +1 more source

Molecular breeding of sugarcane using linkage disequilibrium maps and quantitative trait alleles : [Abstract W247] [PDF]

open access: yes, 2009
Sugarcane breeding generally involves forms of recurrent selection using overlapping generations of parent genotypes, with the number of parents used in the order of 100 to 400, depending on the size of the breeding program.
Butterfield, Mike   +3 more
core  

Phylogenetic relationships in Betula (Betulaceae) based on AFLP markers [PDF]

open access: yes, 2008
The genus Betula comprises various species in boreal and temperate climate zones of the Northern Hemisphere. The taxonomy of Betula is controversial and complicated by parallel evolution of morphological traits, polyploidization events, and extensive ...
Gilissen, L.J.W.J.   +4 more
core   +2 more sources

Chromosome‐Level Genome Assembly of the Allotetraploid Gynostemma pentaphyllum Provides Novel Insights Into the Biosynthesis of Ginsenoside and Gypenoside LVI

open access: yesPlant Biotechnology Journal, EarlyView.
ABSTRACT Gynostemma pentaphyllum, a herb used in tea and traditional Chinese medicine, shows geographic variation in its production of valuable dammarane‐type ginsenosides and gypenoside LVI between populations from Suining (SN) and Nanning (NN). To elucidate the mechanisms underlying this differential metabolite accumulation, a chromosome‐level genome
Peina Zhou   +12 more
wiley   +1 more source

Angiosperm polyploids and their road to evolutionary success [PDF]

open access: yes, 2010
The abundance of polyploidy among flowering plants has long been recognized, and recent studies have uncovered multiple ancient polyploidization events in the evolutionary history of several angiosperm lineages.
Fawcett, Jeffrey, Van de Peer, Yves
core   +2 more sources

Sweet Potato Gene Clusters Control Anthocyanin Biosynthesis and Leaf Morphology

open access: yesPlant Biotechnology Journal, EarlyView.
ABSTRACT Sweet potato (Ipomoea batatas) exhibits diversity in pigmentation and leaf morphology, yet the genetic architecture and regulatory organisation underlying these traits remain poorly resolved, particularly with respect to organ‐specific control.
Dong An   +13 more
wiley   +1 more source

Polyploid Speciation

open access: yes, 2016
Genome duplication represents a dramatic, yet relatively common, genomic change, having occurred in the evolutionary history of angiosperms, vertebrates, and yeast, among many other groups. The result of such duplications ('polyploidy,' the existence of multiple sets of chromosomes within the genome) has long been recognized and was implicated as a ...
Rothfels, CJ, Otto, SP
openaire   +3 more sources

Single‐Cell CRISPR: An Efficient Strategy for Decoding Plant Cis‐Regulatory Complexity

open access: yesPlant Biotechnology Journal, EarlyView.
ABSTRACT The generation of complex traits involves the coordinated interplay of multiple gene networks. Elucidating the function of transcriptional cis‐regulatory elements (CREs) in regulating gene expression is crucial for understanding complex regulatory pathways and improving our ability to modify macro‐phenotypes.
Yuanhang Zhang   +5 more
wiley   +1 more source

The Effect of Polyploidisation on the Physiological Parameters, Biochemical Profile, and Tolerance to Abiotic and Biotic Stresses of Plants

open access: yesAgronomy
Polyploidisation is a very common phenomenon in the plant kingdom and plays a key role in plant evolution and breeding. It promotes speciation and the extension of biodiversity.
Marta Koziara-Ciupa, Anna Trojak-Goluch
doaj   +1 more source

Assignment of SNP allelic configuration in polyploids using Competitive Allele-Specific PCR: application to triploid citrus progenies [PDF]

open access: yes, 2015
Estimation of DNA allele doses in polyploid genotypes is essential to assign the allelic configuration for the different types of heterozygosity for parents and segregating progenies.
Aleza, Pablo   +3 more
core  

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