Results 41 to 50 of about 9,193,993 (329)

Clustering Coefficients of Protein-Protein Interaction Networks

open access: yes, 2007
The properties of certain networks are determined by hidden variables that are not explicitly measured. The conditional probability (propagator) that a vertex with a given value of the hidden variable is connected to k of other vertices determines all ...
B. Alberts   +4 more
core   +1 more source

Sensitivity dependent model of protein-protein interaction networks

open access: yes, 2008
The scale free structure p(k)~k^{-gamma} of protein-protein interaction networks can be reproduced by a static physical model in simulation. We inspect the model theoretically, and find the key reason for the model to generate apparent scale free degree ...
Estojak J   +3 more
core   +1 more source

On combinatorial optimisation in analysis of protein-protein interaction and protein folding networks [PDF]

open access: yes, 2016
: Protein-protein interaction networks and protein folding networks represent prominent research topics at the intersection of bioinformatics and network science.
Chalupa, David
core   +1 more source

Additional file 15: Table S2. of A yeast two-hybrid system for the screening and characterization of small-molecule inhibitors of proteinâ protein interactions identifies a novel putative Mdm2-binding site in p53

open access: yes, 2017
List of yeast strains used in the study. (PDF 111 kb)
Wong, Jin   +6 more
openaire   +1 more source

Multifaceted protein–protein interaction prediction based on Siamese residual RCNN

open access: yesBioinform., 2019
Motivation Sequence-based protein–protein interaction (PPI) prediction represents a fundamental computational biology problem. To address this problem, extensive research efforts have been made to extract predefined features from the sequences.
Muhao Chen   +7 more
semanticscholar   +1 more source

Additional file 14: Table S1. of A yeast two-hybrid system for the screening and characterization of small-molecule inhibitors of proteinâ protein interactions identifies a novel putative Mdm2-binding site in p53

open access: yes, 2017
List of plasmids used in the study. (PDF 66 kb)
Wong, Jin   +6 more
openaire   +1 more source

Influence of homology and node-age on the growth of protein-protein interaction networks [PDF]

open access: yes, 2012
Proteins participating in a protein-protein interaction network can be grouped into homology classes following their common ancestry. Proteins added to the network correspond to genes added to the classes, so that the dynamics of the two objects are ...
Arianna Bottinelli   +4 more
core   +4 more sources

Discovering functional interaction patterns in protein-protein interaction networks

open access: yesBMC Bioinformatics, 2008
Background In recent years, a considerable amount of research effort has been directed to the analysis of biological networks with the availability of genome-scale networks of genes and/or proteins of an increasing number of organisms.
Can Tolga, Turanalp Mehmet E
doaj   +1 more source

Global protein function prediction in protein-protein interaction networks

open access: yes, 2003
The determination of protein functions is one of the most challenging problems of the post-genomic era. The sequencing of entire genomes and the possibility to access gene's co-expression patterns has moved the attention from the study of single proteins
Flammini, A.   +3 more
core   +2 more sources

Small-molecule CaVα1⋅CaVβ antagonist suppresses neuronal voltage-gated calcium-channel trafficking [PDF]

open access: yes, 2018
Extracellular calcium flow through neuronal voltage-gated CaV2.2 calcium channels converts action potential-encoded information to the release of pronociceptive neurotransmitters in the dorsal horn of the spinal cord, culminating in excitation of the ...
Chen, Xingjuan   +10 more
core   +1 more source

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