Results 41 to 50 of about 2,621,675 (239)

Hepatic transcriptome analysis from HFD-fed mice defines a long noncoding RNA regulating cellular cholesterol levels[S]

Journal of Lipid Research, 2019
To elucidate the transcriptomic changes of long noncoding RNAs (lncRNAs) in high-fat diet (HFD)-fed mice, we defined their hepatic transcriptome by RNA sequencing.
Qian Chen, Chaoliang Xiong, Kunyun Jia, Jing Jin, Ziyang Li, Yazhou Huang, Yewen Liu, Lingling Wang, Haitao Luo, Haiyan Li, Qing H. Meng, Wei Li   +11 more
doaj   +1 more source

Permanent Draft Genome Sequence of the French Bean Symbiont Rhizobium sp. Strain RSm-3 Isolated from the Eastern Himalayan Region of India [PDF]

, 2017
The genus Rhizobium contains many species able to form nitrogen-fixing nodules on plants of the legume family. Here, we report the 6.9-Mbp draft genome sequence of Rhizobium sp. strain RSm-3, with a G+C content of 61.4% and 6,511 candidate protein-coding
Abebe-Akele, Feseha, Gtari, Maher, Kar, Pallab, Lama, Dorjay, Morris, Krystalynne, Rai, Ritu, Sarkar, Indrani, Sen, Arnab, Simpson, Stephen, Swanson, Erik, Thomas, W. Kelley, Tisa, Louis S.   +11 more
core   +2 more sources

SWIM: A computational tool to unveiling crucial nodes in complex biological networks [PDF]

, 2017
SWItchMiner (SWIM) is a wizard-like software implementation of a procedure, previously described, able to extract information contained in complex networks.
Colombo, Teresa, Farina, Lorenzo, Fiscon, Giulia, Gurtner, Aymone, Paci, Paola, Pavesi, Giulio   +5 more
core   +2 more sources

Regulation of expression of human RNA polymerase II-transcribed snRNA genes [PDF]

Open Biology, 2017
In addition to protein-coding genes, RNA polymerase II (pol II) transcribes numerous genes for non-coding RNAs, including the small-nuclear (sn)RNA genes.
Joana Guiro, Shona Murphy
doaj   +1 more source

Accumulation of rare coding variants in genes implicated in risk of human cleft lip with or without cleft palate. [PDF]

, 2019
Cleft lip with/without cleft palate (CLP) is a common craniofacial malformation with complex etiologies, reflecting both genetic and environmental factors. Most of the suspected genetic risk for CLP has yet to be identified. To further classify risk loci
Asrani, Kripa, Marini, Nicholas J, Rine, Jasper, Shaw, Gary M, Yang, Wei   +4 more
core   +2 more sources

Efficient labeling and imaging of protein-coding genes in living cells using CRISPR-Tag

Nature Communications, 2018
The lack of efficient tools to image non-repetitive genes in living cells has limited our ability to explore the functional impact of the spatiotemporal dynamics of such genes.
Baohui Chen, Wei Zou, Haiyue Xu, Ying Liang, B. Huang   +4 more
semanticscholar   +1 more source

Characterization of complete mitochondrial genome of Nassarius hepaticus (Stenoglossa, Nassariidae)

Mitochondrial DNA. Part B. Resources, 2019
In the present report, we describe the complete mitochonadrial genome of Nassarius hepaticus. The genome is found to be 15732 bp in length, which contained the typical mitogenome gene set of 22 tRNAs, 13 protein coding genes and 2 rRNAs.
Huai Yang, Yingying Ye, Shuobo Liu, Ming Xu, Baoying Guo   +4 more
doaj   +1 more source

Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana [PDF]

, 2007
We present here the annotation of the complete genome of rice Oryza sativa L. ssp. japonica cultivar Nipponbare. All functional annotations for proteins and non-protein-coding RNA (npRNA) candidates were manually curated.
Antonio, Baltazar A., Aono, Hideo, Apweiler, Rolf, Barrero, Roberto A., Bruskiewich, Richard, Bureau, Thomas, Burr, Benjamin, Burr, Frances, Costa de Oliveira, Antonio, Fujii, Yasuyuki, Fuks, Galina, Gojobori, Takashi, Habara, Takuya, Haberer, Georg, Han, Bin, Harada, Erimi, Higo, Kenichi, Hilton, Phillip B., Hiraki, Aiko T., Hirochika, Hirohiko, Hoen, Douglas, Hokari, Hiroki, Hosokawa, Satomi, Hsing, Yue, Ikawa, Hiroshi, Ikeo, Kazuho, Imanishi, Tadashi, Ito, Yukiyo, Itoh, Takeshi, Jaiswal, Pankaj, Kanno, Masako, Kawahara, Yosihiro, Kawamura, Toshiyuki, Kawashima, Hiroaki, Khurana, Jitendra P., Kikuchi, Shoshi, Komatsu, Setsuko, Koyanagi, Kanako O., Kubooka, Hiromi, Liberherr, Damien, Lin, Yao-Cheng, Lonsdale, David, Matsumoto, Takashi, Matsuya, Akihiro, McCombie, W. Richard, Messing, Joachim, Miyao, Akio, Mulder, Nicola, Nagamura, Yoshiaki, Nam, Jongmin, Namiki, Nobukazu, Numa, Hisataka, Nurimoto, Shin, O'Donovan, Claire, Ohyanagi, Hajimi, Okido, Toshihisa, OOta, Satoshi, Osato, Naoki, Palmer, Lance E., Quetier, Francis, Raghuvanshi, Surabh, Saichi, Naomi, Sakai, Hiroaki, Sakai, Yasumichi, Sakata, Katsumi, Sakurai, Tetsuya, Saski, Takuji, Sato, Fumihiko, Sato, Yoshiharu, Schoof, Heiko, Seki, Motoaki, Shibata, Katsumi, Shibata, Michie, Shimizu, Yuji, Shinozaki, Kazuo, Shinso, Yuji, Singh, Nagendra K., Smith-White, Brian, Takeda, Jun-ichi, Tanaka, Tsuyoshi, Tanino, Motohiko, Tatusova, Tatiana, Thongjuea, Supat, Todokoro, Fusano, Tsugane, Mika, Tyagi, Akhilesh K., Vanavichit, Apichart, Wang, Aihui, Wing, Rod A., Yamaguchi, Kaori, Yamamoto, Mayu, Yamamoto, Naoyuki, Yamasaki, Chisato, Yu, Yeisoo, Zhang, Hao, Zhao, Qiang   +95 more
core   +3 more sources

Non-coding transcript variants of protein-coding genes – what are they good for?

RNA Biology, 2018
The total number of protein-coding genes in the human genome is not significantly higher than those in much simpler eukaryotes, despite a general increase in genome size proportionate to the organismal complexity.
Sonam Dhamija, Manoj B. Menon
semanticscholar   +1 more source

The complete mitochondrial genome and phylogenetic analysis of Batillaria zonalis (Gastropoda: Batillariidae)

Mitochondrial DNA. Part B. Resources, 2020
We determined the complete mitochondrial genome of Batillaria zonalis. The B. zonalis mitochondrial genome is 15748 bp in length, comprising 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes.
Chengrui Yan, Jiantong Feng, Yingying Ye, Jiji Li, Baoying Guo   +4 more
doaj   +1 more source