Results 81 to 90 of about 2,621,675 (239)

RNomics: a computational search for box C/D snoRNA genes in the D. melanogaster genome. [PDF]

, 2004
Motivation: In eukaryotes, the family of non-coding RNA genes includes a number of genes encoding small nucleolar RNAs (mainly C/D and H/ACA snoRNAs), which act as guides in the maturation or post-transcriptional modifications of target RNA molecules ...
ACCARDO MC, CALOGERO RA, DIGILIO FA, FURIA, MARIA, GIORDANO, ENNIO, IAZZETTI, GIOVANNI, RICCARDO S   +6 more
core  

Exons, introns and DNA thermodynamics

, 2005
The genes of eukaryotes are characterized by protein coding fragments, the exons, interrupted by introns, i.e. stretches of DNA which do not carry any useful information for the protein synthesis.
A. Stoltzfus, B. Alberts, C. C. F. Blake, D. Poland, D. Poland, Enrico Carlon, K. A. Marx, Mehdi Lejard Malki, N. J. Dibb, Ralf Blossey, W. Gilbert, W. Gilbert   +11 more
core   +1 more source

Genome sequence of the Lebeckia ambigua-nodulating 'Burkholderia sprentiae' strain WSM5005T [PDF]

, 2013
"Burkholderia sprentiae" strain WSM5005(T) is an aerobic, motile, Gram-negative, non-sporeforming rod that was isolated in Australia from an effective N-2-fixing root nodule of Lebeckia ambigua collected in Klawer, Western Cape of South Africa, in ...
Ardley, Julie, Bruce, David, Chen, I-Min, De Meyer, Sofie, Detter, Chris, Goodwin, Lynne, Han, Cliff, Han, James, Howieson, John, Huntemann, Marcel, Ivanova, Natalia, Kyrpides, Nikos, Lu, Megan, Markowitz, Victor, Mavromatis, Konstantinos, Melino, Vanesssa, Mikhailova, Natalia, O'Hara, Graham, Ovchinnikova, Galina, Pagani, Ioanna, Pati, Amrita, Peters, Lin, Pitluck, Sam, Reeve, Wayne, Rui, Tian, Szeto, Ernest, Tapia, Roxanne, Terpolilli, Jason, Tiwari, Ravi, Wei, Chia-Lin, Woyke, Tanja, Yates, Ron   +31 more
core   +1 more source

Long non-coding RNAs and mRNAs profiling during spleen development in pig. [PDF]

PLoS ONE, 2018
Genome-wide transcriptomic studies in humans and mice have become extensive and mature. However, a comprehensive and systematic understanding of protein-coding genes and long non-coding RNAs (lncRNAs) expressed during pig spleen development has not been ...
Tiandong Che, Diyan Li, Long Jin, Yuhua Fu, Yingkai Liu, Pengliang Liu, Yixin Wang, Qianzi Tang, Jideng Ma, Xun Wang, Anan Jiang, Xuewei Li, Mingzhou Li   +12 more
doaj   +1 more source

Whole transcriptome sequencing of the aging rat brain reveals dynamic RNA changes in the dark matter of the genome [PDF]

, 2012
Brain aging frequently underlies cognitive decline and is a major risk factor for neurodegenerative conditions. The exact molecular mechanisms underlying brain aging, however, remain unknown. Whole transcriptome sequencing provides unparalleled depth and
Brian Merry, João Pedro de Magalhães, Shona H. Wood, Thomas Craig, Yang Li   +4 more
core   +1 more source

Abundant RNA editing sites of chloroplast protein-coding genes in Ginkgo biloba and an evolutionary pattern analysis

BMC Plant Biology, 2016
BackgroundRNA editing is a posttranscriptional modification process that alters the RNA sequence so that it deviates from the genomic DNA sequence. RNA editing mainly occurs in chloroplasts and mitochondrial genomes, and the number of editing sites ...
P. He, Sheng-Nan Huang, G. Xiao, Yuzhou Zhang, Jianing Yu   +4 more
semanticscholar   +1 more source

Network perturbation by recurrent regulatory variants in cancer.

PLoS Computational Biology, 2017
Cancer driving genes have been identified as recurrently affected by variants that alter protein-coding sequences. However, a majority of cancer variants arise in noncoding regions, and some of them are thought to play a critical role through ...
Kiwon Jang, Kwoneel Kim, Ara Cho, Insuk Lee, Jung Kyoon Choi   +4 more
doaj   +1 more source

The complete mitochondrial genome of Rochia nilotica (Gastropoda: Tegulidae)

Mitochondrial DNA. Part B. Resources, 2019
Rochia nilotica is a common marine gastropod species in family Tegulidae. At present, less molecular information of genus Rochia was reported. In the present study, we first determined the complete mitochondrial genome of R. nilotica.
Dianhang Jiang, Zhi Liu, Xiaoqi Zeng, Xianming Tang, Shouguo Yang, Xiaodong Zheng   +5 more
doaj   +1 more source

Genome Sequences of Salisediminibacterium haloalkalitolerans 10nlg, Bacillus lonarensis 25nlg, Bacillus caseinilyticus SP, Pelagirhabdus alkalitolerans S5, Salibacterium halotolerans S7 and Salipaludibacillus aurantiacus S9 Six Novel, Recently Described Compatible Solute Producing Bacteria

Journal of Pure and Applied Microbiology, 2017
Six novel Gram-stain-positive, rod shaped strains of bacteria designated as 10nlgT, 25nlgT, SPT, S5T, S7T and S9T which were isolated from marine ecosystems and soda lake from India, represents novel members of the family Bacillaceae. Apart from 10nlgT,
Vishnuvardhan Reddy Sultanpuram, Thirumala Mothe   +1 more
doaj   +1 more source

PhyloCSF: a comparative genomics method to distinguish protein-coding and non-coding regions [PDF]

, 2010
As high-throughput transcriptome sequencing provides evidence for novel transcripts in many species, there is a renewed need for accurate methods to classify small genomic regions as protein-coding or non-coding.
Arvestad, Blanchette, Brent, Butler, Clark, Goldman, Guttman, Guttman, Holmes, I. Jungreis, Kellis, Lin, M. F. Lin, M. Kellis, Ota, Ozsolak, Stark, Whelan, Yang   +18 more
core   +4 more sources