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Markov Analysis of Protein Sequence Similarities
2003In our previous work, we explored the use of graph-theoretic spectral methods for clustering protein sequences [7]. The nodes of the graph represent a set of proteins to be clustered into families and/or super-families. Edges between nodes are undirected and weighted by the similarities between proteins. We constructed a novel similarity function based
Chakra Chennubhotla 0001 +1 more
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Sequence analysis of expressed proteins
1999Abstract The generation of recombinant proteins may be considered a relatively facile process nowadays. The wide range of expression systems available, and the marketing of specialized molecular biological kits by a number of manufacturers, virtually ensure that reasonable quantities of recombinant proteins can be produced in most ...
Jeff N Keen, Alison E Ashcroft
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Pitfalls of protein sequence analysis
Current Opinion in Biotechnology, 1996B, Rost, A, Valencia
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A Practical Guide to Protein Engineering, 2020
T. S. Wong, Lan-Tee Kang
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T. S. Wong, Lan-Tee Kang
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Expanding functional protein sequence spaces using generative adversarial networks
Nature Machine Intelligence, 2021Aleksej Zelezniak +2 more
exaly
Word embeddings for protein sequence analysis
2023 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB), 2023Ana Marta Sequeira +2 more
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