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DNA Sequence Analysis and Comparative Sequencing
Methods, 1998Abstract This article aims to give an introduction to comparative sequencing and analysis, containing a brief section on sequence production, but focusing on the computer-based ( in silico ) analysis of genomic sequence.
A M, Mallon, M, Strivens
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2022
The collection and understanding of biological sequences once founded bioinformatics as a scientific field, and is still the most common reception even outside the scientific community. In this chapter we introduce principles of sequence analysis, starting on the biological backgrounds, up to algorithmic concerns.
Mario Cannataro +4 more
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The collection and understanding of biological sequences once founded bioinformatics as a scientific field, and is still the most common reception even outside the scientific community. In this chapter we introduce principles of sequence analysis, starting on the biological backgrounds, up to algorithmic concerns.
Mario Cannataro +4 more
+6 more sources
26th IEEE VLSI Test Symposium (vts 2008), 2008
With increasing IC process variation and increased operating speed, it is more likely that even subtle defects will lead to the malfunctioning of a circuit. Various fault models, such as the transition fault model and the path-delay model, have been used to aid delay defect detection.
Jaekwang Lee +2 more
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With increasing IC process variation and increased operating speed, it is more likely that even subtle defects will lead to the malfunctioning of a circuit. Various fault models, such as the transition fault model and the path-delay model, have been used to aid delay defect detection.
Jaekwang Lee +2 more
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Gene Analysis Techniques, 1987
There has been a rapid increase in the number of available protein sequences derived from gene-sequence information. Computer-based sequence analysis of proteins is gaining in importance as an analytical tool. With the help of these analyses such sequences may be characterized and some insights gained into their probable role in the system.
D, Chatterjee, J V, Maizel
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There has been a rapid increase in the number of available protein sequences derived from gene-sequence information. Computer-based sequence analysis of proteins is gaining in importance as an analytical tool. With the help of these analyses such sequences may be characterized and some insights gained into their probable role in the system.
D, Chatterjee, J V, Maizel
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Current Opinion in Structural Biology, 2001
In its early days, the entire field of computational biology revolved almost entirely around biological sequence analysis. Over the past few years, however, a number of new non-sequence-based areas of investigation have become mainstream, from the analysis of gene expression data from microarrays, to whole-genome association discovery, and to the ...
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In its early days, the entire field of computational biology revolved almost entirely around biological sequence analysis. Over the past few years, however, a number of new non-sequence-based areas of investigation have become mainstream, from the analysis of gene expression data from microarrays, to whole-genome association discovery, and to the ...
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ACM Computing Surveys, 2019
Negative sequential patterns (NSPs) produced by negative sequence analysis (NSA) capture more informative and actionable knowledge than classic positive sequential patterns (PSPs) due to involving both occurring and nonoccurring items, which appear in many applications.
Wei Wang 0379, Longbing Cao
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Negative sequential patterns (NSPs) produced by negative sequence analysis (NSA) capture more informative and actionable knowledge than classic positive sequential patterns (PSPs) due to involving both occurring and nonoccurring items, which appear in many applications.
Wei Wang 0379, Longbing Cao
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Sequence Analysis on Microcomputers
Science, 1987Overall, each of the program packages performed their tasks satisfactorily. For analyses where there was a well-defined answer, such as a search for a restriction site, there were few significant differences between the program sets. However, for tasks in which a degree of flexibility is desirable, such as homology or similarity determinations and ...
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Statistical Methods in Medical Research, 1993
Recent developments in the statistical analysis of DNA sequences are reviewed. The pace with which sequence data are being generated and analysed has increased with the growth of the human genome project. Two areas of activity are emphasized: attention to error rates in recorded sequences, and heterogeneity in structure of sequences.
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Recent developments in the statistical analysis of DNA sequences are reviewed. The pace with which sequence data are being generated and analysed has increased with the growth of the human genome project. Two areas of activity are emphasized: attention to error rates in recorded sequences, and heterogeneity in structure of sequences.
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Annual Review of Biochemistry, 1970
FRACTIONATION AND PURIFICATION OF RNA 228 Transfer RNA 228 Ribosomal RNA ... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .. 230 Viral RNA 230 SEPARATION AND ISOLATION OF POLYNUCLEOTIDES 231 Physical methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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FRACTIONATION AND PURIFICATION OF RNA 228 Transfer RNA 228 Ribosomal RNA ... . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .. 230 Viral RNA 230 SEPARATION AND ISOLATION OF POLYNUCLEOTIDES 231 Physical methods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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COMPUTATIONAL ANALYSIS OF GENETIC SEQUENCES
Annual Review of Biophysics and Biophysical Chemistry, 1986Much computational processing of sequence data can be accomplished by applying the kinds of computational tools and processes widely used in text processing, perhaps specialized to sequences, but not necessarily so. A number of programs have been developed specifically to assist in assembling sequences from individually sequenced restriction fragments.
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