Results 41 to 50 of about 180,875 (351)
bioRxiv, 2019 Prediction of residue-residue distance relationships (e.g. contacts) has become the key direction to advance protein tertiary structure prediction since 2014 CASP11 experiment, while deep learning has revolutionized the technology for contact and ...
Jianlin Cheng
semanticscholar +1 more source
Structure of a rare non-standard sequence k-turn bound by L7Ae protein [PDF]
, 2014 Kt-23 from Thelohania solenopsae is a rare RNA kink turn (k-turn) where an adenine replaces the normal guanine at the 2n position. L7Ae is a member of a strongly conserved family of proteins that bind a range of k-turn structures in the ribosome, box C/D
Huang, Lin, Lilley, David M J; id_orcid
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CASP11--An Evaluation of a Modular BCL::Fold-Based Protein Structure Prediction Pipeline. [PDF]
PLoS ONE, 2016 In silico prediction of a protein's tertiary structure remains an unsolved problem. The community-wide Critical Assessment of Protein Structure Prediction (CASP) experiment provides a double-blind study to evaluate improvements in protein structure ...
Axel W Fischer +7 more
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Oxidation of tertiary amine-derivatized surfaces to control protein adhesion [PDF]
, 2013 Selective oxidation of omega-tertiary amine self-assembled thiol monolayers to tertiary amine N-oxides is shown to transform the adhesion of model proteins lysozyme and fibrinogen upon them.
Evans, Stephen D. +12 more
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Comparative analysis of low-frequency vibrational spectra of native and denatured proteins [PDF]
Известия Саратовского университета. Новая серия: ФизикаBackground and Objectives: Changes in the secondary and tertiary structures of protein molecules during thermal denaturation lead to changes in their vibrational spectra.
Mankova, Anna A. +2 more
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Modeling of tertiary and quaternary protein structures by homology [PDF]
, 2012 The structure of a protein is crucial to understand its function. Despite this importance, experimentally solved structures are only available for a small portion of the currently known protein sequences.
Kiefer, Florian
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Nova Biotechnologica et Chimica, 2015 Calcium phosphate nanoparticles (CaPNP) have good biocompatibility and bioactivity inside human body. In this study, the interaction between CaPNP and human chorionic gonadotropin (hCG) was analyzed to determine the changes in the protein structure in ...
Al-Hakeim Hussein K +3 more
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IntFOLD: an integrated web resource for high performance protein structure and function prediction
Nucleic Acids Res., 2019 The IntFOLD server provides a unified resource for the automated prediction of: protein tertiary structures with built-in estimates of model accuracy (EMA), protein structural domain boundaries, natively unstructured or disordered regions in proteins ...
L. McGuffin +6 more
semanticscholar +1 more source
FLORA: a novel method to predict protein function from structure in diverse superfamilies [PDF]
, 2009 Predicting protein function from structure remains an active area of interest, particularly for the structural genomics initiatives where a substantial number of structures are initially solved with little or no functional characterisation.
Dallman Timothy J. +24 more
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DESTINI: A deep-learning approach to contact-driven protein structure prediction
Scientific Reports, 2019 The amino acid sequence of a protein encodes the blueprint of its native structure. To predict the corresponding structural fold from the protein’s sequence is one of most challenging problems in computational biology. In this work, we introduce DESTINI (
Mu Gao, Hongyi Zhou, J. Skolnick
semanticscholar +1 more source