Results 41 to 50 of about 5,500,427 (306)

Scalable Reference Genome Assembly from Compressed Pan-Genome Index with Spark [PDF]

, 2020
High-throughput sequencing (HTS) technologies have enabled rapid sequencing of genomes and large-scale genome analytics with massive data sets. Traditionally, genetic variation analyses have been based on the human reference genome assembled from a ...
Mäkinen, Veli, Keijo Heljanko, Valenzuela, Daniel, Ossi Arasalo, Maarala, Altti Ilari, Heljanko, Keijo, Daniel Valenzuela, Arasalo, Ossi, Veli Mäkinen, Altti Ilari Maarala   +9 more
core   +1 more source

The Gene Ontology's Reference Genome Project: A Unified Framework for Functional Annotation across Species

, 2009
Complete functional annotation of genomes is a powerful tool for researchers; however, such annotation is a time-consuming task limited by the availability of experimental data.
Reference Genome Group, Pascale Gaudet
core   +1 more source

Inverted genomic regions between reference genome builds in humans impact imputation accuracy and decrease the power of association testing

HGG Advances, 2023
Summary: Over the last two decades, the human reference genome has undergone multiple updates as we complete a linear representation of our genome. Two versions of human references are currently used in the biomedical literature, GRCh37/hg19 and GRCh38 ...
Xin Sheng, Lucy Xia, Jordan L. Cahoon, David V. Conti, Christopher A. Haiman, Linda Kachuri, Charleston W.K. Chiang   +6 more
doaj   +1 more source

Will long-read sequencing technologies replace short-read sequencing technologies in the next 10 years?

African Journal of Laboratory Medicine, 2020
No abstract available.
Boluwatife A. Adewale
doaj   +1 more source

A Genomic Reference Panel for Drosophila serrata [PDF]

G3 Genes|Genomes|Genetics, 2018
Abstract Here we describe a collection of re-sequenced inbred lines of Drosophila serrata, sampled from a natural population situated deep within the species endemic distribution in Brisbane, Australia. D. serrata is a member of the speciose montium group whose members inhabit much of south east Asia and has been well studied for ...
Reddiex, Adam J., Allen, Scott L., Chenoweth, Stephen F.   +2 more
openaire   +5 more sources

Addition of the microchromosome GGA25 to the chicken genome sequence assembly through radiation hybrid and genetic mapping [PDF]

, 2008
BACKGROUND: The publication of the first draft chicken sequence assembly became available in 2004 and was updated in 2006. However, this does not constitute a definitive and complete sequence of the chicken genome, since the microchromosomes are ...
Gourichon, David, Dawson, D.A., Deborah A. Dawson (7630160), Gourichon David, Burke, T., F. Vignoles (7630163), Pitel, F., Burke, Terry, Douaud, Marine,, Dawson Deborah A, Olivier Hanotte (89422), Vignoles, Florence, F., Hanotte, Olivier, M. Douaud (7630142), Gourichon, D., Vignoles, F., Morisson, Mireille, Morrison, M., F. Pitel (7630175), Fillon, Valérie, Vignoles Florence, Fillon, V., D. Gourichon (7630157), Gerus, M., M. Tixier-Boichard (7630169), Dawson, D., Bardes, Suzanne, Vignal Alain, Vignoles, Florence,, Fève Katia, Hanotte, O., Vignoles, Florence, S. Bardes (7630154), Bardes Suzanne, Douaud, M., Gerus Marie, Tixier-Boichard, M., K. Fève (7630145), Terry Burke (80052), Vignal, Alain, Bardes, S., Fève, Katia, Pitel, Frédérique, Dawson, Deborah A., Hanotte, Olivier H., Feve, Katia, K., V. Fillon (7630151), Morisson, M., Douaud, Marine, Morisson Mireille, Tixier-Boichard Michèle, Fillon Valérie, M. Gerus (7630148), Douaud Marine, Tixier-Boichard, Michèle, Douaud, Marine, M., Hanotte Olivier, A. Vignal (7630172), M. Morisson (7630166), Dawson, Deborah A, Pitel Frédérique, Gerus, Marie, Feve, Katia,, Vignal, A., Burke Terry, Fève, K.   +65 more
core   +2 more sources

Ovarian Sex Cord Stromal Tumors in Children and Adolescents—The European Standard Clinical Practice Recommendations

Pediatric Blood &Cancer, EarlyView.
ABSTRACT As part of the European Cooperative Study Group for Paediatric Rare Tumours initiative, we developed standard clinical practice guidelines for ovarian sex cord stromal tumors, based on comprehensive national and international cohort analyses, literature review, and a final expert consensus conference.
Dominik T. Schneider, Kris‐Ann Schultz, Nora Schnitzler, Michael Abele, Tal Ben‐Ami, Ewa Bien, Gianni Bisogno, Ines B. Brecht, Maja Cesen, Andrea Ferrari, Michaela Kuhlen, Malgorzata A. Krawczyk, Ricardo Lopez‐Almaraz, Yves Reguerre, Calogero Virgone, Daniel Orbach   +15 more
wiley   +1 more source

A Latitudinal Gradient of Reference Genomes

Molecular Ecology
ABSTRACT Global inequality rooted in legacies of colonialism and uneven development can lead to systematic biases in scientific knowledge. In ecology and evolutionary biology, findings, funding and research effort are disproportionately concentrated at high latitudes, while biological diversity is concentrated at low latitudes.
Ethan B. Linck, Carlos Daniel Cadena
openaire   +2 more sources

A reference-grade wild soybean genome [PDF]

Nature Communications, 2019
AbstractEfficient crop improvement depends on the application of accurate genetic information contained in diverse germplasm resources. Here we report a reference-grade genome of wild soybean accession W05, with a final assembled genome size of 1013.2 Mb and a contig N50 of 3.3 Mb.
Min Xie, Claire Yik-Lok Chung, Man-Wah Li, Fuk-Ling Wong, Xin Wang, Ailin Liu, Zhili Wang, Alden King-Yung Leung, Tin-Hang Wong, Suk-Wah Tong, Zhixia Xiao, Kejing Fan, Ming-Sin Ng, Xinpeng Qi, Linfeng Yang, Tianquan Deng, Lijuan He, Lu Chen, Aisi Fu, Qiong Ding, Junxian He, Gyuhwa Chung, Sachiko Isobe, Takanari Tanabata, Babu Valliyodan, Henry T. Nguyen, Steven B. Cannon, Christine H. Foyer, Ting-Fung Chan, Hon-Ming Lam   +29 more
openaire   +5 more sources

A Reference Genome Sequence for Giant Sequoia [PDF]

G3 Genes|Genomes|Genetics, 2020
Abstract The giant sequoia (Sequoiadendron giganteum) of California are massive, long-lived trees that grow along the U.S. Sierra Nevada mountains. Genomic data are limited in giant sequoia and producing a reference genome sequence has been an important goal to allow marker development for restoration and management.
Alison D. Scott, Aleksey V. Zimin, Daniela Puiu, Rachael Workman, Monica Britton, Sumaira Zaman, Madison Caballero, Andrew C. Read, Adam J. Bogdanove, Emily Burns, Jill Wegrzyn, Winston Timp, Steven L. Salzberg, David B. Neale   +13 more
openaire   +3 more sources