Results 21 to 30 of about 19,820 (248)

Description and determinants of the faecal resistome and microbiome of farmers and slaughterhouse workers: A metagenome-wide cross-sectional study [PDF]

Environment International, 2020
Background: By studying the entire human faecal resistome and associated microbiome, the diversity and abundance of faecal antimicrobial resistance genes (ARGs) can be comprehensively characterized.
Liese Van Gompel, Roosmarijn E.C. Luiken, Rasmus B. Hansen, Patrick Munk, Martijn Bouwknegt, Lourens Heres, Gerdit D. Greve, Peter Scherpenisse, Betty G.M. Jongerius-Gortemaker, Monique H.G. Tersteeg-Zijderveld, Silvia García-Cobos, Wietske Dohmen, Alejandro Dorado-García, Jaap A. Wagenaar, Bert A.P. Urlings, Frank M. Aarestrup, Dik J. Mevius, Dick J.J. Heederik, Heike Schmitt, Alex Bossers, Lidwien A.M. Smit   +20 more
doaj   +2 more sources

Nasal Resistome Development in Infants With Cystic Fibrosis in the First Year of Life [PDF]

Frontiers in Microbiology, 2019
Polymicrobial infections of the respiratory tract due to antibiotic resistant bacteria are a great concern in patients with cystic fibrosis (CF). We therefore aimed at establishing a functional metagenomic method to analyze the nasal resistome in infants
Aurélie Allemann, Aurélie Allemann, Julia G. Kraemer, Julia G. Kraemer, Insa Korten, Insa Korten, Kathryn Ramsey, Carmen Casaulta, on Behalf of SCILD Study Group, Daniel Wüthrich, Daniel Wüthrich, Alban Ramette, Andrea Endimiani, Philipp Latzin, Markus Hilty   +14 more
doaj   +3 more sources

Long-term spatiotemporal dynamics of β-lactamase resistome in the Han River, South Korea [PDF]

Frontiers in Microbiology
The global dissemination of antimicrobial resistance, particularly resistance to widely prescribed β-lactam antibiotics, is a critical public health threat worldwide.
Do-Hoon Lee, Yong-Seok Kim, Dae-Wi Kim, Dong-Sook Kim, Chang-Jun Cha   +4 more
doaj   +2 more sources

Metagenomic Characterisation of Antibiotic Resistance in Anaerobic Digesters and Their Implications for Environmental Health. [PDF]

Environ Microbiol Rep
Anaerobic digester metagenomes revealed diverse resistance‐associated annotations and antibiotic target loci, highlighting their potential role in environmental AMR surveillance. The findings emphasise the need for cautious interpretation of resistome profiles and further host‐resolved analyses to determine the mobility and clinical relevance of ...
Olasupo OA, Olaniyan OP, Akinde SB, Adesoye AA, Ajadi FA, Obire O, Oladipo EK, Sule WF, Oyinloye OE, Salami AA, Fajoyegbe ES, Ajani AJ, Ojo O.   +12 more
europepmc   +2 more sources

Subclinical Mastitis and Antibiotic Exposure Reshape the Milk Bacteriome, Resistome, and Metabolic Functional Profiles in Dairy Cows [PDF]

Microbiologyopen
Overview of the study workflow and metagenomic analysis of bovine milk bacteriomes. Milk samples were collected from dairy cows and classified into three health‐status groups: subclinical mastitis (SCM), antibiotic‐treated (ANT) SCM cows, and healthy milk (HM). Samples were further stratified according to dairy cow breeds (Holstein Friesian Cross; HFC,
Hoque M, Rahman M, Hossain M, Rahman M, Islam T, Hossain M.   +5 more
europepmc   +2 more sources

Pooled Shotgun Metagenomics Reveals Cloacal Microbiota Composition and Resistome Patterns in Chickens from Kazakhstan [PDF]

Microorganisms
Monitoring poultry microbiota and antimicrobial resistance genes is important, as they can reflect flock health, farm conditions, and the level of antimicrobial resistance.
Ilya Korotetskiy, Sergey Shilov, Tatyana Kuznetsova, Natalya Zubenko, Lyudmila Ivanova, Elena Solodova, Nadezhda Korotetskaya, Alfia Tugeyeva, Timur Izmailov   +8 more
doaj   +2 more sources

The European livestock resistome

mSystems
Metagenomic sequencing has proven to be a powerful tool in the monitoring of antimicrobial resistance (AMR). Here, we provide a comparative analysis of the resistome from pigs, poultry, veal calves, turkey, and rainbow trout, for a total of 538 herds ...
P. Munk, Dongsheng Yang, Timo Röder, Leonie Maier, T. Petersen, Ana Sofia R. Duarte, P. L. C. Clausen, Christian Brinch, L. Van Gompel, R. Luiken, J. Wagenaar, H. Schmitt, D. Heederik, D. Mevius, L. Smit, A. Bossers, F. Aarestrup   +16 more
semanticscholar   +8 more sources

The influence of the phylum Planctomycetota in the environmental resistome.

Research in Microbiology
Antimicrobial resistance is one of the leading causes of death worldwide and research on this topic has been on the spotlight for a long time. More recently and in agreement with the One Health Approach, the focus has moved towards the environmental ...
O. Godinho, Damien P. Devos, Sandra Quinteira, O. Lage   +3 more
semanticscholar   +4 more sources

Insights into the dynamics of antibiotic resistance genes in the human gut microbiome across populations [PDF]

Gut Pathogens
The human microbiome serves as a reservoir of antibiotic resistance genes (ARGs), collectively known as the resistome, which has crucial implications for human health.
Deepika Pateriya, Anjli Tanwar, Vineet K. Sharma   +2 more
doaj   +2 more sources

The gut resistome as a potential determinant of immunotherapy response: antibiotics, immunometabolism, and precision oncology [PDF]

Frontiers in Microbiology
Immune checkpoint inhibitors (ICIs) have transformed cancer therapy, yet their efficacy can be compromised by systemic antibiotic exposure and the resulting disruption of the gut microbiome.
Min-Kyung Joo, Jihoon Tak, Suhyeon Ha, Kyung-sik Yoon, Jung-Man Namgoong, Hye Ok Kim, Hye Ok Kim   +6 more
doaj   +2 more sources