Results 21 to 30 of about 179,539 (265)

Temporal dynamics of methyltransferase and restriction endonuclease accumulation in individual cells after introducing a restriction-modification system. [PDF]

open access: goldNucleic Acids Res, 2016
Morozova N   +9 more
europepmc   +3 more sources

A sequential one-pot approach for rapid and convenient characterization of putative restriction-modification systems

open access: yesmSystems, 2023
With the advance of high-throughput sequencing, the molecular basis of coevolutionary interaction between viruses and host microorganisms is predominantly elucidated by in silico genomic analyses, which revealed potential communication of genetic ...
Yi Zhang   +6 more
doaj   +1 more source

Plasmid pEC156, a Naturally Occurring Escherichia coli Genetic Element That Carries Genes of the EcoVIII Restriction-Modification System, Is Mobilizable among Enterobacteria. [PDF]

open access: yesPLoS ONE, 2016
Type II restriction-modification systems are ubiquitous in prokaryotes. Some of them are present in naturally occurring plasmids, which may facilitate the spread of these systems in bacterial populations by horizontal gene transfer.
Olesia Werbowy, Tadeusz Kaczorowski
doaj   +1 more source

Reassembling a cannon in the DNA defense arsenal: Genetics of StySA, a BREX phage exclusion system in Salmonella lab strains.

open access: yesPLoS Genetics, 2022
Understanding mechanisms that shape horizontal exchange in prokaryotes is a key problem in biology. A major limit on DNA entry is imposed by restriction-modification (RM) processes that depend on the pattern of DNA modification at host-specified sites ...
Julie Zaworski   +6 more
doaj   +1 more source

The Hyperthermophilic Restriction-Modification Systems of Thermococcus kodakarensis Protect Genome Integrity

open access: yesFrontiers in Microbiology, 2021
Thermococcus kodakarensis (T. kodakarensis), a hyperthermophilic, genetically accessible model archaeon, encodes two putative restriction modification (R-M) defense systems, TkoI and TkoII.
Kelly M. Zatopek   +6 more
doaj   +1 more source

Restriction modification systems as engines of diversity [PDF]

open access: yesFrontiers in Microbiology, 2015
Restriction modification (RM) systems provide protection against a broad spectrum of phages. However, the likelihood of a phage permanently bypassing this can be as high as 0.1 per infection (Korona et al., 1993) which makes for a relatively weak defense.
Sneppen, Kim   +3 more
openaire   +4 more sources

Individual- and Population-based Diversity in Restriction-modification Systems

open access: greenBulletin of Mathematical Biology, 2000
Restriction-modification (RM) systems are cognate gene complexes that code for an endonuclease and a methylase. They are often thought to have developed in bacteria as protection against invading genetic material, e.g., phage DNA. The high diversity of RM systems, as observed in nature, is often ascribed to the coevolution of RM systems (which 'invent'
Ludo Pagie
openalex   +4 more sources

A Survey of Archaeal Restriction–Modification Systems

open access: yesMicroorganisms, 2023
When compared with bacteria, relatively little is known about the restriction–modification (RM) systems of archaea, particularly those in taxa outside of the haloarchaea. To improve our understanding of archaeal RM systems, we surveyed REBASE, the restriction enzyme database, to catalog what is known about the genes and activities present in the 519 ...
Brian P. Anton, Richard J. Roberts
openaire   +3 more sources

Comparative Methylome Analysis of Campylobacter jejuni Strain YH002 Reveals a Putative Novel Motif and Diverse Epigenetic Regulations of Virulence Genes

open access: yesFrontiers in Microbiology, 2020
Campylobacter jejuni is a major cause of foodborne gastroenteritis worldwide inflicting palpable socioeconomic costs. The ability of this pathogen to successfully infect its hosts is determined not only by the presence of specific virulence genes but ...
Sandeep Ghatak   +3 more
doaj   +1 more source

A Type III restriction–modification system in Mycoplasma mycoides subsp. capri [PDF]

open access: yesOpen Biology, 2012
The sequenced genome of Mycoplasma mycoides subsp. capri revealed the presence of a Type III restriction–modification system (MmyCI). The methyltransferase (modification) subunit of MmyCI (M.MmyCI) was shown to recognize the sequence 5′-TGAG-3′ and ...
Mikkel A. Algire   +4 more
doaj   +1 more source

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