Results 91 to 100 of about 7,960 (219)

Next-level riboswitch development-implementation of Capture-SELEX facilitates identification of a new synthetic riboswitch. [PDF]

open access: yes, 2019
The development of synthetic riboswitches has always been a challenge. Although a number of interesting proof-of-concept studies have been published, almost all of these were performed with the theophylline aptamer. There is no shortage of small molecule-
Braun, Johannes   +8 more
core   +1 more source

Automated design of protein-binding riboswitches for sensing human biomarkers in a cell-free expression system

open access: yesNature Communications, 2023
Cell-free genetically encoded biosensors have been developed to detect small molecules and nucleic acids, but they have yet to be reliably engineered to detect proteins.
Grace E. Vezeau   +2 more
doaj   +1 more source

Evaluating riboswitch optimality

open access: yes, 2019
Riboswitches are RNA elements that recognize diverse chemical and biomolecular inputs, and transduce this recognition process to genetic, fluorescent, and other engineered outputs using RNA conformational changes. These systems are pervasive in cellular biology and are a promising biotechnology with applications in genetic regulation and biosensing ...
Hannah, Wayment-Steele   +3 more
openaire   +3 more sources

Riboswitches and the RNA World [PDF]

open access: yesCold Spring Harbor Perspectives in Biology, 2010
Riboswitches are structured noncoding RNA domains that selectively bind metabolites and control gene expression (Mandal and Breaker 2004a; Coppins et al. 2007; Roth and Breaker 2009). Nearly all examples of the known riboswitches reside in noncoding regions of messenger RNAs where they control transcription or translation.
openaire   +2 more sources

A Synthetic Riboswitch to Regulate Haloarchaeal Gene Expression

open access: yesFrontiers in Microbiology, 2021
In recent years, synthetic riboswitches have become increasingly important to construct genetic circuits in all three domains of life. In bacteria, synthetic translational riboswitches are often employed that modulate gene expression by masking the Shine-
Johannes Born   +4 more
doaj   +1 more source

Folding Kinetics of Riboswitch Transcriptional Terminators and Sequesterers

open access: yesEntropy, 2013
To function as gene regulatory elements in response to environmental signals, riboswitches must adopt specific secondary structures on appropriate time scales.
Ben Sauerwine, Michael Widom
doaj   +1 more source

Ligand-Directed Dynamics of Adenine Riboswitch Conformers [PDF]

open access: yes, 2016
Riboswitches harness the structural and dynamic sophistication of RNA to coordinate specific ligand recognition with changes in gene expression. Design of molecules to manipulate riboswitch responses relies on our understanding of their RNA−ligand ...
Oksana Prychyna (2475709)   +4 more
core   +1 more source

Light‐ and Bioluminescence‐Controlled Reversible Protein Conjugation on the Inner Leaflet of Asymmetric Phospholipid‐Amphiphilic Protein Hybrid Vesicles

open access: yesChemPlusChem, Volume 91, Issue 5, May 2026.
We established light‐ and bioluminescence‐responsive systems that allow reversible conjugation and dissociation of proteins on the inner leaflet of asymmetric lipid–amphiphilic protein hybrid vesicles. These systems provide a versatile platform for precise spatiotemporal regulation and bioluminescence‐triggered protein release within synthetic vesicles.
Masato Suzuki, Koki Kamiya
wiley   +1 more source

Riboswitches and Translation Control [PDF]

open access: yesCold Spring Harbor Perspectives in Biology, 2018
A growing collection of bacterial riboswitch classes is being discovered that sense central metabolites, coenzymes, and signaling molecules. Included among the various mechanisms of gene regulation exploited by these RNA regulatory elements are several that modulate messenger RNA (mRNA) translation. In this review, the mechanisms of riboswitch-mediated
openaire   +2 more sources

Microfluidic Screening of Electrophoretic Mobility Shifts Elucidates Riboswitch Binding Function [PDF]

open access: yes, 2013
Riboswitches are RNA sensors that change conformation upon binding small molecule metabolites, in turn modulating gene expression. Our understanding of riboswitch regulatory function would be accelerated by a high-throughput, quantitative screening tool ...
Qin, Qian   +13 more
core   +1 more source

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