Results 11 to 20 of about 1,474,432 (298)

RNA Sequencing in Schizophrenia [PDF]

open access: yesBioinformatics and Biology Insights, 2015
Schizophrenia (SCZ) is a serious psychiatric disorder that affects 1% of general population and places a heavy burden worldwide. The underlying genetic mechanism of SCZ remains unknown, but studies indicate that the disease is associated with a global ...
Xin Li, Shaolei Teng
doaj   +4 more sources

Immunoprecipitation and Sequencing of Acetylated RNA [PDF]

open access: yesBio-Protocol, 2019
Generation of the epitranscriptome through chemical modifications of protein-coding messenger RNAs (mRNAs) has emerged as a new mechanism of post-transcriptional gene regulation.
Daniel Arango   +2 more
doaj   +3 more sources

RNA Sequencing and Analysis [PDF]

open access: yesCold Spring Harbor Protocols, 2015
RNA sequencing (RNA-Seq) uses the capabilities of high-throughput sequencing methods to provide insight into the transcriptome of a cell. Compared to previous Sanger sequencing- and microarray-based methods, RNA-Seq provides far higher coverage and greater resolution of the dynamic nature of the transcriptome.
Kimberly R, Kukurba   +1 more
openaire   +2 more sources

Advances in application of single-cell RNA sequencing in cardiovascular research

open access: yesFrontiers in Cardiovascular Medicine, 2022
Single-cell RNA sequencing (scRNA-seq) provides high-resolution information on transcriptomic changes at the single-cell level, which is of great significance for distinguishing cell subtypes, identifying stem cell differentiation processes, and ...
Yue Hu   +10 more
doaj   +1 more source

Dual RNA-Seq of Mtb-Infected Macrophages In Vivo Reveals Ontologically Distinct Host-Pathogen Interactions

open access: yesCell Reports, 2020
Summary: Dissecting the in vivo host-pathogen interplay is crucial to understanding the molecular mechanisms governing control or progression of intracellular infections.
Davide Pisu   +3 more
doaj   +1 more source

RNA modifications detection by comparative Nanopore direct RNA sequencing

open access: yesNature Communications, 2021
Nanopore direct RNA Sequencing data contain information about the presence of RNA modifications, but their detection poses substantial challenges. Here the authors introduce Nanocompore, a new methodology for modification detection from Nanopore data.
Adrien Leger   +18 more
doaj   +1 more source

MultiEditR: The first tool for the detection and quantification of RNA editing from Sanger sequencing demonstrates comparable fidelity to RNA-seq

open access: yesMolecular Therapy: Nucleic Acids, 2021
We present MultiEditR (Multiple Edit Deconvolution by Inference of Traces in R), the first algorithm specifically designed to detect and quantify RNA editing from Sanger sequencing (z.umn.edu/multieditr).
Mitchell G. Kluesner   +8 more
doaj   +1 more source

Epidermal Growth Factor Receptor Mutation and Anaplastic Lymphoma Kinase Gene Fusion: Detection in Malignant Pleural Effusion by RNA or PNA Analysis. [PDF]

open access: yesPLoS ONE, 2016
Analyzing EGFR mutations and detecting ALK gene fusion are indispensable when planning to treat pulmonary adenocarcinoma. Malignant pleural effusion (MPE) is a devastating complication of lung cancer and sometimes the only source for mutation analysis ...
Yi-Lin Chen   +10 more
doaj   +1 more source

Single genome sequencing of near full-length HIV-1 RNA using a limiting dilution approach [PDF]

open access: yes, 2019
Sequencing very long stretches of the HIV-1 genome can advance studies on virus evolution and in vivo recombination but remains technically challenging.
Demecheleer, Els   +7 more
core   +1 more source

Detecting RNA modification using direct RNA sequencing: A systematic review

open access: yesComputational and Structural Biotechnology Journal, 2022
Post-transcriptional RNA modifications are involved in a range of important cellular processes, including the regulation of gene expression and fine-tuning of the functions of RNA molecules.
Xichen Zhao   +4 more
doaj   +1 more source

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