Results 31 to 40 of about 1,335,933 (257)
A comprehensive evaluation of alignment algorithms in the context of RNA-seq. [PDF]
, 2012 Transcriptome sequencing (RNA-Seq) overcomes limitations of previously used RNA quantification methods and provides one experimental framework for both high-throughput characterization and quantification of transcripts at the nucleotide level.
Friedel, Caroline C. +8 more
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, 2022 Through RNA sequencing, we explained the mechanism of maintaining the intestinal barrier by activating NRF2 in obese mice and thus alleviating metabolic ...
Ruopeng Yin (12998628)
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Single-Cell RNA Sequencing in Parkinson’s Disease
Biomedicines, 2021 Single-cell and single-nucleus RNA sequencing (sc/snRNA-seq) technologies have enhanced the understanding of the molecular pathogenesis of neurodegenerative disorders, including Parkinson’s disease (PD).
Shi-Xun Ma, Su Bin Lim
doaj +1 more source
A complete RNA-sequencing pipeline
, 2015 <p>First public release of the pipeline used for analysis of RNA-sequencing (RNA-seq) data extended from (Nalpas N.C. et al, http://dx.doi.org/10.5281/zenodo.12474) to include an additional experimental group and novel analyses.</p> <p>
Rue-Albrecht, Kevin, Nalpas, Nicolas C.
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Statistical Tests for Detecting Differential RNA-Transcript Expression from Read Counts [PDF]
, 2010 As a fruit of the current revolution in sequencing technology, transcriptomes can now be analyzed at an unprecedented level of detail. These advances have been exploited for detecting differential expressed genes across biological samples and for ...
Gunnar Rätsch +10 more
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Journal of Horticultural Sciences, 2021 Okra [Abelmoschus esculentus (L.) Moench] also known as bhindi or lady’s finger is an important vegetable crop in India, West Africa, South Africa, Brazil, USA and Turkey. It belongs to the family Malvaceae. Okra is mainly grown in tropics and subtropics
M Gayathri +2 more
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RNA-sequencing: UCD-AlvMac-RNAsequencing
, 2015 <p>Second public release of the pipeline used for analysis of RNA-sequencing (RNA-seq) data extended from (Nalpas, 2015; <a href="http://dx.doi.org/10.5281/zenodo.12474"></a>) to include an additional experimental group and novel ...
Kevin Rue-Albrecht
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Getting the Entire Message: Progress in Isoform Sequencing
Frontiers in Genetics, 2019 The advent of second-generation sequencing and its application to RNA sequencing have revolutionized the field of genomics by allowing quantification of gene expression, as well as the definition of transcription start/end sites, exons, splice sites and ...
Simon A. Hardwick +5 more
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Single-cell RNA sequencing in orthopedic research
Bone Research, 2023 Although previous RNA sequencing methods have been widely used in orthopedic research and have provided ideas for therapeutic strategies, the specific mechanisms of some orthopedic disorders, including osteoarthritis, lumbar disc herniation, rheumatoid ...
Tao Wang +5 more
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Challenges for the development of automated RNA-seq analyses pipelines
GMS Medizinische Informatik, Biometrie und Epidemiologie, 2023 Background: Transcriptional changes are hallmarks of development and disease. RNA sequencing (RNA-seq) allows qualitative and quantitative RNA expression analysis. Raw RNA-seq data passes through a multi-step computational pipeline to derive meaning from
Beukers, Matthieu, Allmer, Jens
doaj +1 more source