Results 11 to 20 of about 868,595 (183)

Evaluating the hologenome concept by analyzing the root-endosphere microbiota of chimeric plants. [PDF]

iScience, 2023
International audienceThe hologenome concept considers the entity formed by a host and its microbiota, the holobiont, as new level of hierarchical organization subject to neutral and selective forces.
Biget M, Wang T, Mony C, Xu Q, Lecoq L, Chable V, Theis KR, Ling N, Vandenkoornhuyse P.   +8 more
europepmc   +7 more sources

Defining the root endosphere and rhizosphere microbiomes from the World Olive Germplasm Collection. [PDF]

Sci Rep, 2019
The bacterial and fungal communities from the olive (Olea europaea L.) root systems have not yet been simultaneously studied. We show in this work that microbial communities from the olive root endosphere are less diverse than those from the rhizosphere.
Fernández-González AJ, Villadas PJ, Gómez-Lama Cabanás C, Valverde-Corredor A, Belaj A, Mercado-Blanco J, Fernández-López M.   +6 more
europepmc   +7 more sources

Bacterial Diversity Associated With the Rhizosphere and Endosphere of Two Halophytes: Glaux maritima and Salicornia europaea [PDF]

Frontiers in Microbiology, 2018
Root-associated microbial communities are very important in the adaptation of halophytes to coastal environments. However, little has been reported on microbial community structures related to halophytes, or on comparisons of their compositions among ...
Kosuke Yamamoto, Yuh Shiwa, Yuh Shiwa, Taichiro Ishige, Hikaru Sakamoto, Keisuke Tanaka, Masataka Uchino, Naoto Tanaka, Suguru Oguri, Hiromasa Saitoh, Seiya Tsushima   +10 more
doaj   +2 more sources

Effects of deoxymugineic acid from rice root exudates on bacterial community composition in rhizosphere and root endosphere

浙江大学学报. 农业与生命科学版, 2023
Under the iron-deficiency condition, roots of graminaceous plants secrete mugineic acids into the soil. To determine the effects of rice root exudate 2´-deoxymugineic acid (DMA) on rhizosphere and root endosphere bacterial community, wild type rice named
YANG Linze, SHOU Huixia
doaj   +2 more sources

Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment [PDF]

Frontiers in Microbiology, 2015
The bacterial microbiota of plants is diverse, with 1,000s of operational taxonomic units (OTUs) associated with any individual plant. In this work we investigate the differences between 19 sequenced Pseudomonas fluorescens strains, isolated from Populus
Collin M Timm, Alisha G Campbell, Sagar M Utturkar, Sagar M Utturkar, Se Ran eJun, Rebecca E Parales, Watumesa eTan, Michael Scott Robeson, Tse-Yuan eLu, Sara eJawdy, Steven D. Brown, Steven D. Brown, David W Ussery, Christopher Warren Schadt, Christopher Warren Schadt, Gerald A Tuskan, Mitchel J Doktycz, David Joseph Weston, Dale Adam Pelletier   +18 more
doaj   +2 more sources

Differential effects of pine wilt disease on root endosphere, rhizosphere, and soil microbiome of Korean white pine. [PDF]

Microbiol Spectr
Pine wilt disease (PWD), caused by pinewood nematodes, is highly destructive to pine forests in Asia and Europe, including Korean white pine (Pinus koraiensis). The microbiome in the needles and trunk of Pinus spp.
Hou Z, Wang M, Xu H, Wang M, Hannula SE.
europepmc   +5 more sources

Assemblages of rhizospheric and root endospheric mycobiota and their ecological associations with functional traits of rice

mBio
The soil-root interface harbors complex fungal communities that play vital roles in the fitness of host plants. However, little is known about the assembly rules and potential functions of rhizospheric and endospheric mycobiota.
Junjie Guo, Huiling Ning, Yong Li, Qicheng Xu, Qirong Shen, Ning Ling, Shiwei Guo   +6 more
doaj   +3 more sources

Differential responses of bacteria and fungi in the rhizoplane and endosphere of aerial roots of Cissus verticillata

Ecosphere
All plant organs have the potential to harbor microbial communities and each organ may form unique niches for specialized microbial communities. There have been very few detailed investigations of microbiomes within a single plant organ along different ...
Yuanyuan Meng, Jocelyn Behm, Sven Landrein   +2 more
doaj   +2 more sources

Unraveling the spatio-temporal dynamics of soil and root-associated microbiomes in Texas olive orchards

Scientific Reports
Understanding the structure and diversity of microbiomes is critical to establishing olives in non-traditional production areas. Limited studies have investigated soil and root-associated microbiota dynamics in olives across seasons or locations in the ...
Dhivya P. Thenappan, Dalton Thompson, Madhumita Joshi, Amit Kumar Mishra, Vijay Joshi   +4 more
doaj   +2 more sources

Comparative Analysis of Rhizosphere and Endosphere Fungal Communities in Healthy and Diseased Faba Bean Plants

Journal of Fungi
This study used the ITS approach based on Illumina MiSeq sequencing to assess the endosphere and rhizosphere fungal communities in healthy and diseased faba bean plants. The findings indicate that the most predominant phyla in all samples were Ascomycota
Juan Li, Lu Hou, Gui Zhang, Liang Cheng, Yujiao Liu   +4 more
doaj   +2 more sources