Metabolic functions of Pseudomonas fluorescens strains from Populus deltoides depend on rhizosphere or endosphere isolation compartment [PDF]
Frontiers in Microbiology, 2015 The bacterial microbiota of plants is diverse, with 1,000s of operational taxonomic units (OTUs) associated with any individual plant. In this work we investigate the differences between 19 sequenced Pseudomonas fluorescens strains, isolated from Populus
Collin M Timm +18 more
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Differential effects of pine wilt disease on root endosphere, rhizosphere, and soil microbiome of Korean white pine. [PDF]
Microbiol SpectrPine wilt disease (PWD), caused by pinewood nematodes, is highly destructive to pine forests in Asia and Europe, including Korean white pine (Pinus koraiensis). The microbiome in the needles and trunk of Pinus spp.
Hou Z, Wang M, Xu H, Wang M, Hannula SE.
europepmc +5 more sources
Bacterial wilt pathogen induced spatial shifts of root-associated microbiome and metabolome of potatoes [PDF]
Frontiers in Plant ScienceIntroductionPlant root-associated microbiomes play an important role in plant health, yet their responses to bacterial wilt remain unclear poorly understood.MethodsThis study investigated spatial variations in microbiome and metabolome composition across
Xianjun Lai +7 more
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Variations in microbial assemblage between rhizosphere and root endosphere microbiomes contribute to host plant growth under cadmium stress. [PDF]
Applied and Environmental Microbiology, 2023 Tangfu Xiao, Enzong Xiao, Jinmei Deng
exaly +2 more sources
Regulation of root-associated microbiomes and root exudates by different tobacco species
Chemical and Biological Technologies in AgricultureBackground The root-associated microbiomes are crucial in promoting plant growth and development through symbiotic interactions with their hosts. Plants may shape their microbiomes by secreting specific root exudates.
Mengli Gu +9 more
doaj +2 more sources
Sweet Sorghum Genotypes Tolerant and Sensitive to Nitrogen Stress Select Distinct Root Endosphere and Rhizosphere Bacterial Communities. [PDF]
Microorganisms, 2021 The belowground microbiomes have many beneficial functions that assist plant growth, including nutrient cycling, acquisition and transport, as well as alleviation of stresses caused by nutrient limitations such as nitrogen (N).
Lopes LD +5 more
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Distribution of root-associated bacterial communities along a salt-marsh primary succession [PDF]
Frontiers in Plant Science, 2016 Proper quantification of the relative influence of soil and plant host on the root-associated microbiome can only be achieved by studying its distribution along an environmental gradient. Here we used an undisturbed salt marsh chronosequence to study the
Miao eWang +2 more
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Journal of FungiThis study used the ITS approach based on Illumina MiSeq sequencing to assess the endosphere and rhizosphere fungal communities in healthy and diseased faba bean plants. The findings indicate that the most predominant phyla in all samples were Ascomycota
Juan Li +4 more
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Differentiation of endospheric microbiota in ancient and modern wheat cultivars roots [PDF]
Plant-Environment Interactions, 2021 Modern plant breeding and agrosystems artificialization could have altered plants’ ability to filter and recruit beneficial microorganisms in its microbiota. Thus, compared to modern cultivars, we hypothesized that root-endosphere microbiota in modern wheat cultivars are less resistant to colonization by fungi and bacteria and thus more susceptible to ...
Solène Mauger +6 more
openaire +3 more sources
The microbiome of a perennial cereal differs from annual winter wheat only in the root endosphere. [PDF]
ISME CommunAbstract The intensification of agriculture has led to environmental degradation, including the loss of biodiversity. This has prompted interest in perennial grain cropping systems to address and mitigate some of these negative impacts.
Michl K +12 more
europepmc +7 more sources