Results 41 to 50 of about 19,445,077 (386)

Flexible RNA design under structure and sequence constraints using formal languages [PDF]

, 2013
The problem of RNA secondary structure design (also called inverse folding) is the following: given a target secondary structure, one aims to create a sequence that folds into, or is compatible with, a given structure.
Denise, Alain, Ponty, Yann, Vialette, Stéphane, Waldispühl, Jérôme, Zhang, Yi, Zhou, Yu   +5 more
core   +5 more sources

Structural Modification of Jackfruit Leaf Protein Concentrate by Enzymatic Hydrolysis and Their Effect on the Emulsifier Properties

Colloids and Interfaces, 2022
Jackfruit leaf protein concentrate (LPC) was hydrolyzed by pepsin (H–Pep) and pancreatin (H–Pan) at different hydrolysis times (30–240 min). The effect of the enzyme type and hydrolysis time of the LPC on the amino acid composition, structure, and ...
Carolina Calderón-Chiu, Montserrat Calderón-Santoyo, Julio César Barros-Castillo, José Alfredo Díaz, Juan Arturo Ragazzo-Sánchez   +4 more
doaj   +1 more source

An O(n^5) algorithm for MFE prediction of kissing hairpins and 4-chains in nucleic acids [PDF]

, 2008
Efficient methods for prediction of minimum free energy (MFE) nucleic secondary structures are widely used, both to better understand structure and function of biological RNAs and to design novel nano-structures.
Chen, Ho-Lin, Condon, Anne, Jabbari, Hosna   +2 more
core   +3 more sources

Secondary structures and their effects on antioxidant capacity of antioxidant peptides in yogurt

International Journal of Food Properties, 2018
The pH, thermal, urea, and trifluoroethanol treatments were used to denature yogurt antioxidant peptides, and their antioxidant capacities and secondary structures were analysed.
HaiNa Yuan, JianMin Lv, JinYan Gong, GongNian Xiao, RuiYu Zhu, Ling Li, JiangNan Qiu   +6 more
doaj   +1 more source

Exploring Prediction of Antimicrobial Resistance Based on Protein Solvent Accessibility Variation

Frontiers in Genetics, 2021
Antimicrobial resistance (AMR) is a significant and growing public health threat. Sequencing of bacterial isolates is becoming more common, and therefore automatic identification of resistant bacterial strains is of pivotal importance for efficient, wide-
Simone Marini, Simone Marini, Marco Oliva, Ilya B. Slizovskiy, Noelle Robertson Noyes, Christina Boucher, Mattia Prosperi   +6 more
doaj   +1 more source

Secondary-Structure Design of Proteins by a Backbone Torsion Energy [PDF]

, 2005
We propose a new backbone-torsion-energy term in the force field for protein systems. This torsion-energy term is represented by a double Fourier series in two variables, the backbone dihedral angles phi and psi.
Berendsen H. J. C., Blanco F. J., Cornell W. D., Duan Y., Garcia A. E., Honda S., Iwaoka M., Jorgensen W. L., Kabsch W., Kaminski G. A., Kamiya N., Kirkpatrick S., Kobayashi N., Kraulis P. J., MacKerell A. D., MacKerrell A. D., Merritt E. A., Mitsutake A., Némethy G., Osterhout J. J., Qiu D., Ramachandran G. N., Sakae Y., Sakae Y., Sakae Y., Shoemaker K. R., Simmerling C., Still W. C., Wang J., Yoda T., Yoda T.   +30 more
core   +2 more sources

JPred4: a protein secondary structure prediction server

Nucleic Acids Res., 2015
JPred4 (http://www.compbio.dundee.ac.uk/jpred4) is the latest version of the popular JPred protein secondary structure prediction server which provides predictions by the JNet algorithm, one of the most accurate methods for secondary structure prediction.
Alexey Drozdetskiy, C. Cole, J. Procter, G. Barton   +3 more
semanticscholar   +1 more source

The pedagogical model for developing research/investigation competence in primary school students (Natural Sciences)

Studia Universitatis Babeş-Bolyai. Psychologia-Paedagogia
The article presents the theoretical foundation of the pedagogical model for developing research/investigation competence in primary school students (Natural Sciences) - DCCI-ECP (NS).
Marieta NEAGU
doaj   +1 more source

Effect of oxidative treatment on the secondary structure of decoloured bloodmeal [PDF]

, 2014
Bloodmeal can be decoloured using peracetic acid resulting in a material with a pale-yellow colour which only needs sodium dodecyl sulphate, water and triethylene glycol to extrude into a semi-transparent bioplastic.
Bier, James Michael, Hicks, Talia, Lay, Mark C., Verbeek, Casparus Johan R.   +3 more
core   +2 more sources

A new strategy for cellulases application in high temperature industrial scenarios with syringic acid assisting

GCB Bioenergy, 2023
In the process of bioethanol production, more stable and active cellulase in high temperature condition is required. In this study, syringic acid was applied in cellulase hydrolysis system.
Qiuping Ran, Mengtian Huang, Huanan Li, Bixin Chen, Lili He, Xinxin Cui, Jiashu Liu, Zhengbing Jiang   +7 more
doaj   +1 more source