Natural polymorphism in the thrombospondin-related adhesive protein of Plasmodium falciparum [PDF]
, 1998 We have developed a typing system using natural sequence variation in the thrombospondin-related adhesive protein (TRAP) gene of Plasmodium falciparum. This method permits a haplotype to be assigned to any particular TRAP gene.
Bosman, Andrea +9 more
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Identification and typing of human enterovirus: a genomic barcode approach. [PDF]
PLoS ONE, 2011 Identification and typing of human enterovirus (HEVs) are important to pathogen detection and therapy. Previous phylogeny-based typing methods are mainly based on multiple sequence alignments of specific genes in the HEVs, but the results are not stable ...
Chengguo Wei +6 more
doaj +1 more source
Microorganisms, 2022 Despite the active development of SARS-CoV-2 surveillance methods (e.g., Nextstrain, GISAID, Pangolin), the global emergence of various SARS-CoV-2 viral lineages that potentially cause antiviral and vaccine failure has driven the need for accurate and ...
Miao Miao, Erik De Clercq, Guangdi Li
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insights by genetic characterization [PDF]
, 2014 Background Giardia duodenalis is a common flagellated protozoan parasite that infects the small intestine of a wide range of vertebrate hosts. This study aimed to determine whether tracing of G.
Aebischer, Toni +7 more
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The sequencing-based typing tool of dbMHC: typing highly polymorphic gene sequences [PDF]
Nucleic Acids Research, 2004 The dbMHC resource (http://www.ncbi.nlm.nih.gov/mhc/sbt.cgi?cmd=main) at the National Center for Biotechnology Information (NCBI) has developed an online tool for evaluating the allelic composition of sequencing-based typing (SBT) results of cDNA or genomic sequences.
Wolfgang, Helmberg +2 more
openaire +2 more sources
Frontiers in Microbiology, 2018 Vibrio cholerae O1 strains taken from the repository of Yunnan province, southwest China, were abundant and special. We selected 70 typical toxigenic V.
Feng Liao +9 more
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Epidemiology of Giardia duodenalis infection in ruminant livestock and children in the Ismailia province of Egypt: insights by genetic characterization [PDF]
, 2014 Background: Giardia duodenalis is a common flagellated protozoan parasite that infects the small intestine of a wide range of vertebrate hosts. This study aimed to determine whether tracing of G.
Christian Klotz +7 more
core +1 more source
Implications of HLA sequence-based typing in transplantation
Journal of Postgraduate Medicine, 2008 Serology-based conventional microlymphocytotoxicity HLA typing method, which has been regarded as the gold standard in organ and hematopoietic stem cell transplantation, has been replaced now by DNA-based typing. Many laboratories all over the world have already switched over to molecular methods. Microlymphocytotoxicity-based
Shankarkumar, U., Pawar, A., Ghosh, K.
openaire +2 more sources
Molecular typing of the pneumococcus and its application in epidemiology in sub-Saharan Africa
Frontiers in Cellular and Infection Microbiology, 2013 Molecular typing of the pneumococcus has played a crucial role in understanding the epidemiology of the organism. However, most of what is known about molecular epidemiology of the pneumococcus pertains to the developed world.
Eric S Donkor
doaj +1 more source
Comparative genomic assessment of Multi-Locus Sequence Typing: rapid accumulation of genomic heterogeneity among clonal isolates of Campylobacter jejuni [PDF]
, 2008 Background Multi-Locus Sequence Typing (MLST) has emerged as a leading molecular typing method owing to its high ability to discriminate among bacterial isolates, the relative ease with which data acquisition and analysis can be standardized, and the ...
Eduardo N Taboada +5 more
core +1 more source