Sequence-based typing of leptospira: epidemiology in the genomic era. [PDF]
PLoS Neglected Tropical Diseases, 2007 Paul N Levett
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Sequence-Based Typing of Human Blood Groups [PDF]
Transfusion Medicine and Hemotherapy, 2009 In the last two decades, all but one of the genes encoding the 30 blood group systems present on red blood cells have been identified. This body of knowledge has permitted the application of molecular techniques to characterize the common blood group antigens and to elucidate the background for some of the variant phenotypes. DNA sequencing methodology
Axel, Seltsam, Andrea, Doescher
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Novel multilocus sequence typing scheme reveals high genetic diversity of human pathogenic members of the Fusarium incarnatum-F. equiseti and F. chlamydosporum species complexes within the United States [PDF]
, 2009 Species limits within the clinically important Fusarium incarnatum-F. equiseti and F. chlamydosporum species complexes (FIESC and FCSC, respectively) were investigated using multilocus DNA sequence data.
O'Donnell, K. +5 more
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Dynamic Phylogenetic Inference for Sequence-based Typing Data [PDF]
Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics, 2017 Typing methods are widely used in the surveillance of infectious diseases, outbreaks investigation and studies of the natural history of an infection. And their use is becoming standard, in particular with the introduction of High Throughput Sequencing (HTS).
Francisco, Alexandre +2 more
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Frontiers in Public Health, 2020 More human deaths have been attributable to Mycobacterium tuberculosis than any other pathogen, and the epidemic is sustained by ongoing transmission.
Alexander C. Outhred +14 more
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Non-idempotent intersection types and strong normalisation [PDF]
Logical Methods in Computer Science, 2013 We present a typing system with non-idempotent intersection types, typing a term syntax covering three different calculi: the pure {\lambda}-calculus, the calculus with explicit substitutions {\lambda}S, and the calculus with explicit substitutions ...
Alexis Bernadet, Stéphane Jean Lengrand
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Prevalence, antimicrobial resistance and genetic diversity of Campylobacter coli and Campylobacter jejuni in Ecuadorian broilers at slaughter age [PDF]
, 2017 Thermotolerant Campylobacter spp. are a major cause of foodborne gastrointestinal infections worldwide. The linkage of human campylobacteriosis and poultry has been widely described.
Cisneros, Marco +5 more
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Multispacer Typing Technique for Sequence-Based Typing ofBartonella quintana [PDF]
Journal of Clinical Microbiology, 2005 ABSTRACTBartonella quintanais a worldwide fastidious bacterium of the Alphaproteobacteria responsible for bacillary angiomatosis, trench fever, chronic lymphadenopathy, and culture-negative endocarditis. The recent genome sequencing of aB. quintanaisolate allowed us to propose a genome-wide sequence-based typing method.
C, Foucault +4 more
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Journal of Infection and Public Health, 2009 Summary: The sequence-based type 1,4,3,1,1,1 of Legionella pneumophila sg.1 is predominant in the Palermo city environment since several years. In this study, extended sequence-based typing and pulsed field gel electrophoresis were used in a combined ...
Celestino Bonura +5 more
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Cronobacter, the emergent bacterial pathogen Enterobacter sakazakii comes of age; MLST and whole genome sequence analysis [PDF]
, 2014 Background: Following the association of Cronobacter spp. to several publicized fatal outbreaks in neonatal intensive care units of meningitis and necrotising enterocolitis, the World Health Organization (WHO) in 2004 requested the establishment of a ...
Dickins, B, Forsythe, SJ, Jolley, KA
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