Copper Ions Induce DNA Sequence Variation in Zygotic Embryo Culture-Derived Barley Regenerants
Frontiers in Plant Science, 2021 In vitro tissue culture could be exploited to study cellular mechanisms that induce sequence variation. Altering the metal ion composition of tissue culture medium affects biochemical pathways involved in tissue culture-induced variation. Copper ions are
Renata Orłowska +2 more
doaj +1 more source
Identification of novel cryptosporidium genotypes from the Czech Republic [PDF]
, 2003 Isolates of Cryptosporidium from the Czech Republic were characterized from a variety of different hosts using sequence and phylogenetic analysis of the 18S ribosomal DNA and the heat-shock (HSP-70) gene.
Ryan, U. +5 more
core +2 more sources
A Deep Learning Model for Predicting DNA N6-Methyladenine (6mA) Sites in Eukaryotes
IEEE Access, 2020 DNA N6-methyladenine (6mA) is an epigenetic modification, which is involved in many biological regulation processes like DNA replication, DNA repair, transcription, and gene expression regulation.
Lokuthota Hewage Roland +1 more
doaj +1 more source
Completely mitochondrial genome of Neolissochilus heterostomus
Mitochondrial DNA. Part B. Resources, 2021 In this study, we determined the complete mitochondrial genome of Neolissochilus heterostomus. The genome is 16,585 bp in length, including 2 ribosomal RNA genes, 13 proteins-coding genes, 22 transfer RNA genes, and two non-coding control regions ...
Jinghong He +5 more
doaj +1 more source
High-Throughput DNA Analysis Platform Based on an Optofluidic Ring Resonator Laser
Applied Sciences, 2022 We demonstrate an optofluidic laser using DNA microdroplets, an intercalating dye, and a glass capillary ring resonator. Only the target DNA emits the laser signal, while the non-target DNA, including those with single-base mismatches, exhibits zero ...
Chan Seok Jun, Wonsuk Lee
doaj +1 more source
Multiplexed DNA-Modified Electrodes [PDF]
, 2010 We report the use of silicon chips with 16 DNA-modified electrodes (DME chips) utilizing DNA-mediated charge transport for multiplexed detection of DNA and DNA-binding protein targets.
Barton, Jacqueline K. +3 more
core +2 more sources
Towards precision quantification of contamination in metagenomic sequencing experiments
Microbiome, 2019 Metagenomic next-generation sequencing (mNGS) experiments involving small amounts of nucleic acid input are highly susceptible to erroneous conclusions resulting from unintentional sequencing of occult contaminants, especially those derived from ...
M. S. Zinter +4 more
doaj +1 more source
Mesoscopic Model for Free Energy Landscape Analysis of DNA sequences [PDF]
, 2012 A mesoscopic model which allows us to identify and quantify the strength of binding sites in DNA sequences is proposed. The model is based on the Peyrard-Bishop-Dauxois model for the DNA chain coupled to a Brownian particle which explores the sequence ...
D. Prada-Gracia +8 more
core +3 more sources
Detection and characterization of tomato leaf curl New Delhi virus association with mosaic disease of ivy gourd (Coccinia grandis (L.) Voigt) in North India [PDF]
Archives of Biological Sciences, 2018 Sixteen ivy gourd (Coccinia grandis (L.) Voigt) plant samples showing severe mosaic symptoms were collected from New Delhi and Varanasi (Uttar Pradesh) in India. Begomovirus infection was confirmed by PCR using begomovirusspecific primers.
Venkataravanappa Venkataravanappa +4 more
doaj +1 more source
BioLink, 2021 To understand the fundamental mechanisms on genes in plant cells can be performed by gene expression studies. The study needs reference genes that act as internal control to avoid expression data bias.
Putri Agustina, Dewi Indriyani Roslim
doaj +1 more source