Results 21 to 30 of about 5,258,715 (348)

Improved mass spectrometry compatibility is afforded by ammoniacal silver staining [PDF]

open access: yes, 2006
Sequence coverage in MS analysis of protein digestion-derived peptides is a key issue for detailed characterization of proteins or identification at low quantities.
Berggren   +19 more
core   +3 more sources

A protein structural study based on the centrality analysis of protein sequence feature networks.

open access: yesPLoS ONE, 2021
In this paper, we use network approaches to analyze the relations between protein sequence features for the top hierarchical classes of CATH and SCOP. We use fundamental connectivity measures such as correlation (CR), normalized mutual information rate ...
Xiaogeng Wan, Xinying Tan
doaj   +1 more source

Linking glycemic dysregulation in diabetes to symptoms, comorbidities, and genetics through EHR data mining

open access: yeseLife, 2019
Diabetes is a diverse and complex disease, with considerable variation in phenotypic manifestation and severity. This variation hampers the study of etiological differences and reduces the statistical power of analyses of associations to genetics ...
Isa Kristina Kirk   +20 more
doaj   +1 more source

Progressive search in tandem mass spectrometry

open access: yesBMC Bioinformatics, 2023
Background High-throughput Proteomics has been accelerated by (tandem) mass spectrometry. However, the slow speed of mass spectra analysis prevents the analysis results from being up-to-date.
Yoonsung Joh   +3 more
doaj   +1 more source

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry.

open access: yesProceedings of the National Academy of Sciences of the United States of America, 2004
Peptide sequence analysis using a combination of gas-phase ion/ion chemistry and tandem mass spectrometry (MS/MS) is demonstrated. Singly charged anthracene anions transfer an electron to multiply protonated peptides in a radio frequency quadrupole ...
J. Syka   +4 more
semanticscholar   +1 more source

Structural genomics analysis of uncharacterized protein families overrepresented in human gut bacteria identifies a novel glycoside hydrolase. [PDF]

open access: yes, 2014
BackgroundBacteroides spp. form a significant part of our gut microbiome and are well known for optimized metabolism of diverse polysaccharides. Initial analysis of the archetypal Bacteroides thetaiotaomicron genome identified 172 glycosyl hydrolases and
Axelrod, Herbert L   +7 more
core   +2 more sources

Analysis of protein sequences [PDF]

open access: yesGenome Biology, 2000
Several programs to predict sequence and structural features of a protein can be run simultaneously on the PredictProtein server.
openaire   +2 more sources

Liquid Chromatography Electron Capture Dissociation Tandem Mass Spectrometry (LC-ECD-MS/MS) versus Liquid Chromatography Collision-induced Dissociation Tandem Mass Spectrometry (LC-CID-MS/MS) for the Identification of Proteins [PDF]

open access: yes, 2007
Electron capture dissociation (ECD) offers many advantages over the more traditional fragmentation techniques for the analysis of peptides and proteins, although the question remains: How suitable is ECD for incorporation within proteomic strategies for ...
A. G. Marshall   +38 more
core   +4 more sources

Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions (supplement).

open access: yesDNA Research, 1996
The sequence determination of the entire genome of the Synechocystis sp. strain PCC6803 was completed. The total length of the genome finally confirmed was 3,573,470 bp, including the previously reported sequence of 1,003,450 bp from map position 64% to ...
T. Kaneko   +23 more
semanticscholar   +1 more source

The Cytoplasmic N,n'-Diacetylchitobiase Gene From Vibrio Parahaemolyticus: Sequence Analysis, Protein Secretion, and Secretion System Development.

open access: yes, 1996
The nucleotide sequence of the gene encoding the cytoplasmic N ,N '-d iacetylchitobiase from Vibrio parahaem olyticus has been determ ined. The deduced peptide sequence surprisingly has m inim um evolutionary relationship to two other reported iV,iV ...
Michael H. Wu
semanticscholar   +1 more source

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