Results 51 to 60 of about 2,190,860 (309)

Geometric combinatorics and computational molecular biology: branching polytopes for RNA sequences

open access: yes, 2016
Questions in computational molecular biology generate various discrete optimization problems, such as DNA sequence alignment and RNA secondary structure prediction.
Drellich, Elizabeth   +5 more
core   +1 more source

RNA sequencing analysis of the developing chicken retina

open access: yesScientific Data, 2016
AbstractRNA sequencing transcriptome analysis using massively parallel next generation sequencing technology provides the capability to understand global changes in gene expression throughout a range of tissue samples. Development of the vertebrate retina requires complex temporal orchestration of transcriptional activation and repression.
Langouet-Astrie, Christophe J.   +4 more
openaire   +2 more sources

Encryption of Stereo Image Based on Fractional Chaotic System and RNA Encoding

open access: yesTaiyuan Ligong Daxue xuebao, 2021
For the increasingly wide usage of stereo images, a stereo image encryption algorithm based on fractional-order hyper-chaotic system and dynamic Ribonucleic Acid (RNA) encoding was proposed. In the chaotic sequence generation stage, SHA-256 hash function
Zhenyu LI   +3 more
doaj   +1 more source

Discovery of RNA secondary structural motifs using sequence-ordered thermodynamic stability and comparative sequence analysis

open access: yesMethodsX, 2023
Major advances in RNA secondary structural motif prediction have been achieved in the last few years; however, few methods harness the predictive power of multiple approaches to deliver in-depth characterizations of local RNA motifs and their potential ...
Jake M. Peterson   +4 more
doaj  

Hantavirus in African Wood Mouse, Guinea

open access: yesEmerging Infectious Diseases, 2006
Hantaviruses are rodentborne, emerging viruses that cause life-threatening human diseases in Eurasia and the Americas. We detected hantavirus genome sequences in an African wood mouse (Hylomyscus simus) captured in Sangassou, Guinea.
Boris Klempa   +9 more
doaj   +1 more source

Structural Alignment of RNAs Using Profile-csHMMs and Its Application to RNA Homology Search: Overview and New Results [PDF]

open access: yes, 2008
Systematic research on noncoding RNAs (ncRNAs) has revealed that many ncRNAs are actively involved in various biological networks. Therefore, in order to fully understand the mechanisms of these networks, it is crucial to understand the roles of ncRNAs ...
Vaidyanathan, P. P., Yoon, Byung-Jun
core   +2 more sources

Streamlining Quantitative Analysis of Long RNA Sequencing Reads [PDF]

open access: yesInternational Journal of Molecular Sciences, 2020
Transcriptome analyses allow for linking RNA expression profiles to cellular pathways and phenotypes. Despite improvements in sequencing methodology, whole transcriptome analyses are still tedious, especially for methodologies producing long reads. Currently, available data analysis software often lacks cost- and time-efficient workflows.
Sebastian Oeck   +3 more
openaire   +5 more sources

Leveraging current insights on IL‐10‐producing dendritic cells for developing effective immunotherapeutic approaches

open access: yesFEBS Letters, EarlyView.
In vivo IL‐10 produced by tissue‐resident tolDC is involved in maintaining/inducing tolerance. Depending on the agent used for ex vivo tolDC generation, cells acquire common features but prime T cells towards anergy, FOXP3+ Tregs, or Tr1 cells according to the levels of IL‐10 produced. Ex vivo‐induced tolDC were administered to patients to re‐establish/
Konstantina Morali   +3 more
wiley   +1 more source

Heteroduplex analysis of the RNA of clone 3 Moloney murine sarcoma virus [PDF]

open access: yes, 1979
Heteroduplex analysis of the RNA isolated from purified virions of clone 3 Moloney murine sarcoma virus (M-MSV) hybridized to cDNA's from Moloney murine leukemia virus (M-MLV) and clone 124 M-MSV shows that the main physical component of clone 3 RNA is ...
Chen, Yueh-Hsiu   +3 more
core  

A computational method for estimating the PCR duplication rate in DNA and RNA-seq experiments. [PDF]

open access: yes, 2017
BackgroundPCR amplification is an important step in the preparation of DNA sequencing libraries prior to high-throughput sequencing. PCR amplification introduces redundant reads in the sequence data and estimating the PCR duplication rate is important to
Bansal, Vikas
core   +2 more sources

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