Results 31 to 40 of about 6,424,932 (374)

A domain sequence approach to pangenomics: applications to Escherichia coli [v2; ref status: indexed, http://f1000r.es/ul]

open access: yesF1000Research, 2013
The study of microbial pangenomes relies on the computation of gene families, i.e. the clustering of coding sequences into groups of essentially similar genes. There is no standard approach to obtain such gene families.
Lars-Gustav Snipen, David W Ussery
doaj   +1 more source

Sequence of a putative human housekeeping gene (HK33) localized on chromosome 1 [PDF]

open access: yes, 1994
A gene (X33) localized on human chromosome 1 has been detected by crossreaction of its fusion protein with a monospecific antiserum directed against human vitamin-D-binding protein (hDBP; group-specific component).
Chirgwin   +18 more
core   +1 more source

Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence [PDF]

open access: yes, 2003
BACKGROUND: Previous studies have suggested that recent segmental duplications, which are often involved in chromosome rearrangements underlying genomic disease, account for some 5% of the human genome.
Cheung, Joseph   +6 more
core   +2 more sources

SeGraM: A Universal Hardware Accelerator for Genomic Sequence-to-Graph and Sequence-to-Sequence Mapping [PDF]

open access: yes, 2022
A critical step of genome sequence analysis is the mapping of sequenced DNA fragments (i.e., reads) collected from an individual to a known linear reference genome sequence (i.e., sequence-to-sequence mapping). Recent works replace the linear reference sequence with a graph-based representation of the reference genome, which captures the genetic ...
arxiv   +1 more source

Single nucleotide polymorphisms from Theobroma cacao expressed sequence tags associated with witches' broom disease in cacao [PDF]

open access: yes, 2009
In order to increase the efficiency of cacao tree resistance to witches¿ broom disease, which is caused by Moniliophthora perniciosa (Tricholomataceae), we looked for molecular markers that could help in the selection of resistant cacao genotypes.
Carels, Nicolas   +10 more
core   +1 more source

SCCmecFinder, a Web-Based Tool for Typing of Staphylococcal Cassette Chromosome mec in Staphylococcus aureus Using Whole-Genome Sequence Data

open access: yesmSphere, 2018
Typing of methicillin-resistant Staphylococcus aureus (MRSA) is important in infection control and surveillance. The current nomenclature of MRSA includes the genetic background of the S.
Hülya Kaya   +9 more
doaj   +1 more source

Integer Sequences and Output Arrays [PDF]

open access: yesarXiv, 2022
The first author recently introduced an integer sequence now numbered A355519 in OEIS. This sequence arose from counting bracket tournaments; its study evokes the analysis of the Catalan triangle (sequence A009766 in OEIS) and the related Catalan numbers, sequence A000108 in OEIS.
arxiv  

Lineage-specific interface proteins match up the cell cycle and differentiation in embryo stem cells

open access: yesStem Cell Research, 2014
The shortage of molecular information on cell cycle changes along embryonic stem cell (ESC) differentiation prompts an in silico approach, which may provide a novel way to identify candidate genes or mechanisms acting in coordinating the two programs. We
Angela Re   +4 more
doaj   +1 more source

On a construction method of new moment sequences [PDF]

open access: yesarXiv, 2023
In this paper we provide a way to construct new moment sequences from a given moment sequence. An operator based on multivariate positive polynomials is applied to get the new moment sequences. A class of new sequences is corresponding to a unique symmetric polynomial; if this polynomial is positive, then the new sequence becomes again a moment ...
arxiv  

Asymptotic Analysis of Regular Sequences [PDF]

open access: yesAlgorithmica, 2019
Abstract In this article, q-regular sequences in the sense of Allouche and Shallit are analysed asymptotically. It is shown that the summatory function of a regular sequence can asymptotically be decomposed as a finite sum of periodic fluctuations multiplied by a scaling factor. Each of these terms corresponds to an eigenvalue of the sum of matrices of
Clemens Heuberger, Daniel Krenn
openaire   +4 more sources

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