Results 91 to 100 of about 8,102,704 (303)

Sequence Covering Similarity for Symbolic Sequence Comparison

open access: yesCoRR, 2018
This paper introduces the sequence covering similarity, that we formally define for evaluating the similarity between a symbolic sequence (string) and a set of symbolic sequences (strings). From this covering similarity we derive a pair-wise distance to compare two symbolic sequences. We show that this covering distance is a semimetric.
openaire   +4 more sources

Ligand‐dependent transcriptional heterogeneity in cell cycle gene expression delays G1/S entry

open access: yesFEBS Letters, EarlyView.
EGF and HRG induce distinct G1/S progression programs in ErbB2‐amplified BT474 breast cancer cells. Despite activating the potent ErbB2–ErbB3 heterodimer, HRG does not accelerate cell‐cycle entry. Instead, EGF promotes earlier restriction‐point passage via ERK–FOS signaling, whereas HRG activates the AKT–MYC axis, driving transcriptional heterogeneity ...
Ririn Rahmala Febri   +5 more
wiley   +1 more source

Performance comparison using m-sequence stimulation for cVEP BCI.

open access: yes, 2018
Performance comparison using m-sequence stimulation for cVEP BCI.
Sebastian Nagel (5879615)   +1 more
core   +1 more source

Emerging experimental and computational methods for studying redox‐regulated structural transitions

open access: yesFEBS Letters, EarlyView.
Redox reactions can reshape proteins and alter how they behave in cells, with important consequences for health and disease. This review explores emerging experimental and computational approaches for discovering these redox‐sensitive protein switches, revealing their structural effects, and predicting their behavior, opening new opportunities to ...
Tasneem Rass   +2 more
wiley   +1 more source

Comparison of sequence annotation for five CJIE4 prophages.

open access: yes, 2014
Comparison of sequence annotation for five CJIE4 prophages.
Philip Mabon (588360)   +5 more
core   +1 more source

Functional comparison of EncB and EncC cargo proteins in iron storage within the Myxococcus xanthus encapsulin

open access: yesFEBS Letters, EarlyView.
Encapsulins are protein nanocompartments that play an important role in iron storage. In the Myxococcus xanthus encapsulin system, two cargo proteins called EncB and EncC contribute to iron mineralization. Here, we show that EncB and EncC generate iron‐containing minerals with distinct chemical compositions, suggesting that the composition of stored ...
Harry B. McDowell   +2 more
wiley   +1 more source

Quantification of Inter-Sample Differences in T-Cell Receptor Repertoires Using Sequence-Based Information

open access: yesFrontiers in Immunology, 2017
Inter-sample comparisons of T-cell receptor (TCR) repertoires are crucial for gaining a better understanding of the immunological states determined by different collections of T cells from different donor sites, cell types, and genetic and pathological ...
Ryo Yokota   +4 more
doaj   +1 more source

Structural and biochemical analysis of a B12 superbinder

open access: yesFEBS Letters, EarlyView.
BtuG proteins are vitamin B12 scavengers in Bacteroides thetaiotaomicron, a dominant human gut bacterium. We present crystal structures of three BtuG homologs bound to cobalamin and its precursor cobinamide, revealing picomolar binding affinities, among the highest known for any natural protein.
Jose M. Martinez Felices   +3 more
wiley   +1 more source

Mitogenomic Analysis and Conservation Genetics of the Endangered Oriental Stork (Ciconia boyciana)

open access: yesAnimals
Despite the endangered status of the Oriental Stork (Ciconia boyciana) on the IUCN Red List, a critical lack of contemporary mitochondrial genomic data from its core distribution areas in mainland China has hindered our understanding of the species’ long-
Xiao-Die Chen   +6 more
doaj   +1 more source

Summary of pairwise sequence comparison.

open access: yes, 2014
Pairwise comparison of analysed enhancer sequences and number of similarity islands identified by BLAST (blastn) alignment. Each regulatory region was used as a reference sequence and compared to all other sequence elements. The number of sequence motifs
Ana Angulo (139676)   +2 more
core   +1 more source

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