Results 11 to 20 of about 312,657 (243)

The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia

open access: yesScientific Reports, 2022
Oryza australiensis is a wild rice native to monsoonal northern Australia. The International Oryza Map Alignment Project emphasises its significance as the sole representative of the EE genome clade. Assembly of the O. australiensis genome has previously
Aaron L. Phillips   +6 more
doaj   +1 more source

Genome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium Wilt

open access: yesMolecular Plant-Microbe Interactions, 2021
Fusarium oxysporum f. sp. conglutinans is the causal agent of Fusarium wilt of cabbage (Brassica oleracea var. capitata L.), which results in severe yield loss. Here, we report a high-quality genome sequence of a race 1 strain (IVC-1) of F.
Fangwei Yu   +7 more
doaj   +1 more source

An Improved Genome Assembly of Azadirachta indica A. Juss.

open access: yesG3: Genes, Genomes, Genetics, 2016
Neem (Azadirachta indica A. Juss.), an evergreen tree of the Meliaceae family, is known for its medicinal, cosmetic, pesticidal and insecticidal properties.
Neeraja M. Krishnan   +4 more
doaj   +1 more source

The complete chloroplast genome of Keteleeria evelyniana

open access: yesMitochondrial DNA. Part B. Resources, 2021
Here, we report the complete chloroplast genome of Keteleeria evelyniana. The genome is 116,940 bp in size, which is comprised of a large single-copy (LSC) region of 74,075 bp, a small single-copy (SSC) region of 40,425 bp, and two short inverted repeat (
Yaqi Li   +6 more
doaj   +1 more source

A Short Report on the Markov Property of DNA Sequences on 200-bp Genomic Units of Roadmap Genomics ChromHMM Annotations: A Computational Perspective [PDF]

open access: yesGenomics & Informatics, 2018
The non-coding DNA in eukaryotic genomes encodes a language that programs chromatin accessibility, transcription factor binding, and various other activities. The objective of this study was to determine the effect of the primary DNA sequence on the epigenomic landscape across a 200-base pair of genomic units by integrating 127 publicly available ...
openaire   +3 more sources

Chromosome-length genome assembly and structural variations of the primal Basenji dog (Canis lupus familiaris) genome

open access: yesBMC Genomics, 2021
Background Basenjis are considered an ancient dog breed of central African origins that still live and hunt with tribesmen in the African Congo. Nicknamed the barkless dog, Basenjis possess unique phylogeny, geographical origins and traits, making their ...
Richard J. Edwards   +18 more
doaj   +1 more source

Genome-Wide Association Analysis of Incident Coronary Heart Disease (CHD) in African Americans: A Short Report

open access: yesPLoS Genetics, 2011
African Americans have the highest rate of mortality due to coronary heart disease (CHD). Although multiple loci have been identified influencing CHD risk in European-Americans using a genome-wide association (GWAS) approach, no GWAS of incident CHD has been reported for African Americans. We performed a GWAS for incident CHD events collected during 19
Maja Barbalic   +9 more
openaire   +6 more sources

The complete and fully assembled genome sequence of Aeromonas salmonicida subsp. pectinolytica and its comparative analysis with other Aeromonas species: investigation of the mobilome in environmental and pathogenic strains

open access: yesBMC Genomics, 2018
Background Due to the predominant usage of short-read sequencing to date, most bacterial genome sequences reported in the last years remain at the draft level.
Friedhelm Pfeiffer   +6 more
doaj   +1 more source

Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats

open access: yesNature Communications, 2020
The complexity of structural variation (SV) and short tandem repeats (STRs) makes it necessary to apply different calling and filtering strategies to sequencing datasets. Here, Jakubosky et al.
David Jakubosky   +11 more
doaj   +1 more source

Genome sequence of the white-rot fungus Irpex lacteus F17, a type strain of lignin degrader fungus

open access: yesStandards in Genomic Sciences, 2017
Irpex lacteus, a cosmopolitan white-rot fungus, degrades lignin and lignin-derived aromatic compounds. In this study, we report the high-quality draft genome sequence of I.
Mengwei Yao   +4 more
doaj   +1 more source

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