Results 51 to 60 of about 197,713 (247)

Short hydrophobic loop motifs in BRICHOS domains determine chaperone activity against amorphous protein aggregation but not against amyloid formation

open access: yesCommunications Biology, 2023
ATP-independent molecular chaperones are important for maintaining cellular fitness but the molecular determinants for preventing aggregation of partly unfolded protein substrates remain unclear, particularly regarding assembly state and basis for ...
Gefei Chen   +10 more
doaj   +1 more source

The Impact of the Long-Distance Transport of a BEL1-Like Messenger RNA on Development [PDF]

open access: yes, 2012
BEL1- and KNOTTED1-type proteins are transcription factors from the three-amino-loop-extension superclass that interact in a tandem complex to regulate the expression of target genes.
Gonzalez, Daniel Hector   +4 more
core   +1 more source

A new procedure to analyze RNA non-branching structures [PDF]

open access: yes, 2015
RNA structure prediction and structural motifs analysis are challenging tasks in the investigation of RNA function. We propose a novel procedure to detect structural motifs shared between two RNAs (a reference and a target).
FISCON, GIULIA   +3 more
core   +1 more source

Detecting Superbubbles in Assembly Graphs [PDF]

open access: yes, 2013
We introduce a new concept of a subgraph class called a superbubble for analyzing assembly graphs, and propose an efficient algorithm for detecting it.
Onodera, Taku   +2 more
core   +1 more source

Evaluasi Ekstraksi Fitur GLCM dan LBP Menggunakan Multikernel SVM untuk Klasifikasi Batik

open access: yesJurnal RESTI (Rekayasa Sistem dan Teknologi Informasi), 2021
Batik as one of Indonesia's cultural heritages has various types, motifs and colors. A batik may have almost the same motif with a different color or vice versa, therefore it requires a classification of batik motifs.
Pulung Nurtantio Andono   +1 more
doaj   +1 more source

Comparative Analysis of Structural Features in SLiMs from Eukaryotes, Bacteria, and Viruses with Importance for Host-Pathogen Interactions

open access: yesPathogens, 2022
Protein-protein interactions drive functions in eukaryotes that can be described by short linear motifs (SLiMs). Conservation of SLiMs help illuminate functional SLiMs in eukaryotic protein families. However, the simplicity of eukaryotic SLiMs makes them
Heidy Elkhaligy   +2 more
doaj   +1 more source

Controllability of protein-protein interaction phosphorylation-based networks: Participation of the hub 14-3-3 protein family [PDF]

open access: yes, 2016
Posttranslational regulation of protein function is an ubiquitous mechanism in eukaryotic cells. Here, we analyzed biological properties of nodes and edges of a human protein-protein interaction phosphorylation-based network, especially of those nodes ...
Bustos, Diego Martin   +2 more
core   +1 more source

High-throughput methods for identification of protein-protein interactions involving short linear motifs. [PDF]

open access: yesCell Commun Signal, 2015
Interactions between modular domains and short linear motifs (3-10 amino acids peptide stretches) are crucial for cell signaling. The motifs typically reside in the disordered regions of the proteome and the interactions are often transient, allowing for rapid changes in response to changing stimuli.
Blikstad C, Ivarsson Y.
europepmc   +4 more sources

ELM—the database of eukaryotic linear motifs [PDF]

open access: yes, 2017
Linear motifs are short, evolutionarily plastic components of regulatory proteins and provide low-affinity interaction interfaces. These compact modules play central roles in mediating every aspect of the regulatory functionality of the cell.
Altenberg, Brigitte   +28 more
core  

Structural Covariance in the Hard Sphere Fluid [PDF]

open access: yes, 2018
We study the joint variability of structural information in a hard sphere fluid biased to avoid crystallisation and form fivefold symmetric geometric motifs.
Carter, Benjamin M. G. D.   +3 more
core   +4 more sources

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