Results 121 to 130 of about 6,254 (216)

Exploring the Modulation of the Complex Folding Landscape of Human Telomeric DNA by a Low Molecular Weight Ligand

open access: yesChemistry – A European Journal, Volume 31, Issue 32, June 6, 2025.
Time‐resolved nuclear magnetic resonance (NMR) and circular dichroism (CD) spectroscopy were utilized to investigate the complex G‐quadruplex folding landscape of the human telomeric DNA in the presence of the ligand Phen‐DC3. Our findings revealed significant differences in the kinetics of the pathways originating from the unfolded or K+‐bound state ...
Ines Burkhart   +3 more
wiley   +1 more source

Automated smFRET microscope for the quantification of label-free DNA oligos

open access: yesBiomedical Optics Express, 2019
Single-molecule FRET (smFRET) spectroscopy is a powerful tool for studying inhomogeneous dynamics in biological systems. However, because of the intrinsic variations that accompany the sample sizes, massive data sets are essential to extract statistically reliable information.
Ran Lin, Yuhong Wang
openaire   +2 more sources

Conformational changes in Arp2/3 complex induced by ATP, WASp-VCA, and actin filaments [PDF]

open access: yes, 2018
We used fluorescence spectroscopy and EM to determine how binding of ATP, nucleation-promoting factors, actin monomers, and actin filaments changes the conformation of Arp2/3 complex during the process that nucleates an actin filament branch.
Chou, Steven Z.   +4 more
core   +1 more source

Kinetic Subpopulations Detected by Single-molecule Spectroscopy: Fundamental Property of Functional Nucleic Acids or Experimental Artefact?

open access: yesCHIMIA, 2013
Single-molecule spectroscopy allows the direct observation of conformational dynamics in individual biomolecules. Here, we describe how single-molecule Förster resonance energy transfer (smFRET) reveals heterogeneous kinetics in the EBS1*/IBS1 ...
Sebastian L. B. König   +2 more
doaj   +1 more source

Conformational transition of FGFR kinase activation revealed by site-­specific unnatural amino acid reporter and single molecule FRET [PDF]

open access: yes, 2017
Protein kinases share significant structural similarity; however, structural features alone are insufficient to explain their diverse functions. Thus, bridging the gap between static structure and function requires a more detailed understanding of ...
Alexandrov, Y   +10 more
core  

eIF4G stimulates the activity of the DEAD box protein eIF4A by a conformational guidance mechanism [PDF]

open access: yes, 2017
The activity of eIF4A, a key player in translation initiation, is regulated by other translation factors through currently unknown mechanisms. Here, we provide the necessary framework to understand the mechanism of eIF4A's regulation by eIF4G.
Gubaev, Airat   +3 more
core  

Probing Allostery in Oligomeric M2 Receptors using smFRET [PDF]

open access: yesBiophysical Journal, 2021
Dennis D. Fernandes   +2 more
openaire   +1 more source

An optimization algorithm for single-molecule fluorescence resonance (smFRET) data processing

open access: yesActa Physica Sinica, 2017
The single-molecule fluorescence resonance energy transfer (smFRET) technique plays an important role in the development of biophysics. Measuring the changes of the fluorescence intensities of donor and acceptor and of the FRET efficiency can reveal the changes of distance between the labeling positions.
null Lü Xi-Ming   +7 more
openaire   +1 more source

Single Viruses on the Fluorescence Microscope: Imaging Molecular Mobility, Interactions and Structure Sheds New Light on Viral Replication

open access: yesViruses, 2018
Viruses are simple agents exhibiting complex reproductive mechanisms. Decades of research have provided crucial basic insights, antiviral medication and moderately successful gene therapy trials. The most infectious viral particle is, however, not always
Nagma Parveen   +3 more
doaj   +1 more source

The Spliceosomal Protein Prp8 Stabilizes A Compact Conformation Of The U2-U6 Complex [PDF]

open access: yes, 2012
The spliceosome is a large, RNA-protein complex that catalyzes pre-mRNA splicing during mRNA maturation. The RNA components (small nuclear RNA; snRNAs) of the spliceosome have been well studied and are believed to be involved in the splicing catalysis ...
Subasinghe, Subasinghe Appuhamilage Lemintha Imali
core   +1 more source

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