Results 161 to 170 of about 4,500 (194)

Single-Molecule Techniques for Probing the Conformation, Dynamics and Interactions of Intrinsically Disordered Proteins. [PDF]

Biophys Rev (Melville)
DeCoeur D, Chen M, Chen J.
europepmc   +1 more source

HSV-1 origin binding protein UL9 forms intermolecular DNA tethers and intramolecular DNA loops. [PDF]

Nat Commun
Meier AF, Vuckovic J, Girvan P, Jalal ASB, Cutts E, Brophy T, Ambrose B, Rueda DS.   +7 more
europepmc   +1 more source

Single-molecule dynamics reveal ATP binding alone powers substrate translocation by an ABC transporter. [PDF]

Nat Commun
Nocker C, Pečak M, Nocker T, Fahim A, Sušac L, Tampé R.   +5 more
europepmc   +1 more source

A universal protein ladder for standardisation of diverse FRET assays

Smith ER, Gelder KL, Hunter-Craig L, Bose DA, Craggs TD, Twelvetrees AE.   +5 more
europepmc   +1 more source

Protein disorder controls allostery in DNA

Rosenblum G, Terterov I, Mishra SK, Elad N, Gianga T, Hussain R, Siligardi G, Hofmann H.   +7 more
europepmc   +1 more source

Dye'ing for FRET: The HTH motif in smFRET-MD simulation

, 2009
openaire   +1 more source

A Two-Step Method for smFRET Data Analysis

Journal of Physical Chemistry B, 2016
We demonstrate a two-step data analysis method to increase the accuracy of single-molecule Förster Resonance Energy Transfer (smFRET) experiments. Most current smFRET studies are at a time resolution on the millisecond level. When the system also contains molecular dynamics on the millisecond level, simulations show that large errors are present (e.g.,
Anatoly Kolomeisky, Jixin Chen, Christy Landes   +2 more
exaly   +4 more sources

Riboswitch Structure and Dynamics by smFRET Microscopy [PDF]

Methods in Enzymology, 2014
Riboswitches are structured noncoding RNA elements that control the expression of their embedding messenger RNAs by sensing the intracellular concentration of diverse metabolites. As the name suggests, riboswitches are dynamic in nature so that studying their inherent conformational dynamics and ligand-mediated folding is important for understanding ...
Nils Walter, Krishna Chaitanya Suddala
exaly   +3 more sources

Metal ion induced heterogeneity in RNA folding studied by smFRET

Coordination Chemistry Reviews, 2016
More than two decades of investigating nucleic acids and ribonucleic acids (RNA) using single molecule Förster resonance energy transfer (smFRET) have passed.
Richard Borner, Roland Sigel, Danny Kowerko   +2 more
exaly   +2 more sources

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Learning continuous potentials from smFRET

Biophysical Journal, 2022
ABSTRACT Potential energy landscapes are useful models in describing events such as protein folding and binding. While single molecule fluorescence resonance energy transfer (smFRET) experiments encode information on continuous potentials for the system probed, including rarely visited barriers between putative potential minima, this ...
J. Shepard Bryan, Steve Pressé
openaire   +2 more sources