Results 21 to 30 of about 4,500 (194)

Structural Dynamics of Glutamate Signaling Systems by smFRET [PDF]

open access: yesBiophysical Journal, 2020
Single-molecule Förster resonance energy transfer (smFRET) is a powerful technique for investigating the structural dynamics of biological macromolecules. smFRET reveals the conformational landscape and dynamic changes of proteins by building on the static structures found using cryo-electron microscopy, x-ray crystallography, and other methods ...
Ryan J. Durham   +3 more
openaire   +2 more sources

Single-Molecule Forster Resonance Energy Transfer With a Minimalistic 3D-Printed Setup and Dyes in the Blue-Green Spectral Region. [PDF]

open access: yesChemphyschem
Single‐molecule FRET enables nanometer‐scale insights into biomolecular structure and dynamics but often requires complex instrumentation. We present the FRET‐Brick, a minimalistic, 3D‐printed microspectroscopy platform using 488 nm continuous‐wave excitation and PMT detection.
Moya Muñoz GG   +6 more
europepmc   +2 more sources

Simulations of camera-based single-molecule fluorescence experiments. [PDF]

open access: yesPLoS ONE, 2018
Single-molecule microscopy has become a widely used technique in (bio)physics and (bio)chemistry. A popular implementation is single-molecule Förster Resonance Energy Transfer (smFRET), for which total internal reflection fluorescence microscopy is ...
Richard Börner   +5 more
doaj   +1 more source

Conformational Dynamics of DNA Polymerases Revealed at the Single-Molecule Level

open access: yesFrontiers in Molecular Biosciences, 2022
DNA polymerases are intrinsically dynamic macromolecular machines. The purpose of this review is to describe the single-molecule Förster resonance energy transfer (smFRET) methods that are used to probe the conformational dynamics of DNA polymerases ...
David P. Millar
doaj   +1 more source

Single-photon smFRET. III. Application to pulsed illumination

open access: yesBiophysical Reports, 2022
Abstract Förster resonance energy transfer (FRET) using pulsed illumination has been pivotal in leveraging lifetime information in FRET analysis. However, there remain major challenges in quantitative single photon, single molecule FRET (smFRET) data analysis under pulsed illumination including: 1) simultaneously deducing kinetics and ...
Matthew Safar   +7 more
openaire   +2 more sources

Methods for automating the analysis of live-cell single-molecule FRET data

open access: yesFrontiers in Cell and Developmental Biology, 2023
Single-molecule FRET (smFRET) is a powerful imaging platform capable of revealing dynamic changes in the conformation and proximity of biological molecules.
Jozsef Meszaros   +11 more
doaj   +1 more source

Single Molecule FRET: A Powerful Tool to Study Intrinsically Disordered Proteins

open access: yesBiomolecules, 2018
Intrinsically disordered proteins (IDPs) are often modeled using ideas from polymer physics that suggest they smoothly explore all corners of configuration space.
Sharonda J. LeBlanc   +2 more
doaj   +1 more source

Cooperative Analysis of Structural Dynamics in RNA-Protein Complexes by Single-Molecule Förster Resonance Energy Transfer Spectroscopy

open access: yesMolecules, 2020
RNA-protein complexes (RNPs) are essential components in a variety of cellular processes, and oftentimes exhibit complex structures and show mechanisms that are highly dynamic in conformation and structure.
Nathalie Meiser   +2 more
doaj   +1 more source

BOBA FRET: bootstrap-based analysis of single-molecule FRET data. [PDF]

open access: yesPLoS ONE, 2013
Time-binned single-molecule Förster resonance energy transfer (smFRET) experiments with surface-tethered nucleic acids or proteins permit to follow folding and catalysis of single molecules in real-time. Due to the intrinsically low signal-to-noise ratio
Sebastian L B König   +6 more
doaj   +1 more source

DeepFRET, a software for rapid and automated single-molecule FRET data classification using deep learning

open access: yeseLife, 2020
Single-molecule Förster Resonance energy transfer (smFRET) is an adaptable method for studying the structure and dynamics of biomolecules. The development of high throughput methodologies and the growth of commercial instrumentation have outpaced the ...
Johannes Thomsen   +8 more
doaj   +1 more source

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