Results 111 to 120 of about 912,053 (206)

Whole genome SNP genotype piecemeal imputation

, 2015
Background Despite ongoing reductions in the cost of sequencing technologies, whole genome SNP genotype imputation is often used as an alternative for obtaining abundant SNP genotypes for genome wide association studies.
Lin, Guohui, Wang, Yining, Stothard, Paul, Wylie, Tim   +3 more
core   +1 more source

Crucial parameters for precise copy number variation detection in formalin‐fixed paraffin‐embedded solid cancer samples

Molecular Oncology
Copy number variations (CNVs) play a crucial role in cancer diagnostics and prognostics, potentially impacting treatment decisions. Ultra‐low‐pass whole‐genome sequencing (ULP‐WGS) has emerged as a promising alternative to array‐based methods for CNV ...
Hanne Goris, Vasiliki Siozopoulou, Léon C vanKempen, Anne Sieben, Ella Roelant, Stig Hellemans, Elyne Backx, Laure Sorber, Koen De Winne, Senada Koljenović, Karen Zwaenepoel   +10 more
doaj   +1 more source

Summary of RNA-Seq and SNP array data.

, 2012
Summary of RNA-Seq and SNP array data.
Anastasia Hrabovsky (139067), Mingyan Lin (139065), Herbert M. Lachman (139079), Tao Wang (12008), Erika Pedrosa (139072), Deyou Zheng (7943)   +5 more
core   +1 more source

Combining genotyping approaches improves resolution for association mapping: a case study in tropical maize under water stress conditions

Frontiers in Plant Science
Genome-wide Association Studies (GWAS) identify genome variations related to specific phenotypes using Single Nucleotide Polymorphism (SNP) markers. Genotyping platforms like SNP-Array or sequencing-based techniques (GBS) can genotype samples with many ...
Fernanda Carla Ferreira de Pontes, Ingrid Pinheiro Machado, Maria Valnice de Souza Silveira, Antônio Lucas Aguiar Lobo, Felipe Sabadin, Roberto Fritsche-Neto, Júlio César DoVale   +6 more
doaj   +1 more source

Resultados obtidos de uma amostra de pacientes estudados por hibridização genômica comparativa por chips de oligonucleotídeos (cgh array) em Santa Catarina: análise dos fatores: indicação, taxa diagnóstica e aplicabilidade. [PDF]

, 2013
TCC(graduação) - Universidade Federal de Santa Catarina. Centro de Ciências Biológicas. Biologia.No Brasil, de acordo com o Censo 2010, 1,37% da população brasileira apresenta deficiência intelectual.
Anselmi, Mayara
core  

Applying SNP array technology to assess genetic diversity in Russian gene pool of chickens [PDF]

, 2017
Development of high throughput next generation technologies for genome-wide genotyping opens new prospects for characterizing various gene pool populations of chickens. Use of SNP array technology allows determining the extent of their genetic diversity,
Dementieva, Natalia V., Perinek, Oksana Yu, Terletsky, Valeriy P., Fedorova, Elena S., Stanishevskaya, Olga I., Romanov, Michael N, Plemyashov, Kirill V, Kudinov, Andrei A., Larkina, Tatiana A., Pleshanov, Nikolai V.   +9 more
core   +1 more source

SNP-index information of the three markers.

, 2016
SNP-index information of the three markers.
Yuanjun Ye (2872955), Ming Cai (342151), Huitang Pan (395889), Lu Feng (193271), Yiqian Ju (2872961), Qixiang Zhang (395887), Yao Jiao (2872958), Tangren Cheng (395888)   +7 more
core   +1 more source

Genetic testing for fetal loss of heterozygosity using single nucleotide polymorphism array and whole-exome sequencing

Scientific Reports
The study explored the clinical significance of fetal loss of heterozygosity (LOH) identified by single-nucleotide polymorphism array (SNP array). We retrospectively reviewed data from pregnant women who underwent invasive diagnostic procedures at ...
Huili Xue, Aili Yu, Lin Zhang, Lingji Chen, Qun Guo, Min Lin, Na lin, Xuemei Chen, Liangpu Xu, Hailong Huang   +9 more
doaj   +1 more source

Development and application of a 20K SNP array in potato

, 2016
In this thesis the results are described of investigations of various application of genome wide SNP (single nucleotide polymorphism) markers. The set of SNP markers was identified by GBS (genotyping by sequencing) strategy. The resulting dataset of 129,156 SNPs across 83 tetraploid varieties was used directly to map traits, but also as a basis for the
openaire   +2 more sources

Workflow for SNP detection, validation, filtering, and final choice employed for development of the International Peach SNP Consortium (IPSC) peach 9 K SNP array v1.

, 2012
Workflow for SNP detection, validation, filtering, and final choice employed for development of the International Peach SNP Consortium (IPSC) peach 9 K SNP array v1.
Todd C. Mockler (110557), Larry Wilhelm (110561), Nahla Bassil (110538), Federica Cattonaro (158236), Douglas W. Bryant (110559), Pere Arús (17639), Cameron Peace (110535), Elisa Vendramin (171088), Simone Scalabrin (171067), Cynthia T. Lawley (171073), Dorrie Main (4682), Barbara Gilmore (110553), Diego Micheletti (83159), Maria José Aranzana (16559), Michele Morgante (83623), Ksenija Gasic (171078), Andrea L. Blas (171101), Amy Iezzoni (110563), Bryon Sosinski (171109), Ignazio Verde (171060), Umesh R. Rosyara (110543), Valeria Aramini (171096), Michela Troggio (83147)   +22 more
core   +1 more source