Results 1 to 10 of about 75,225 (256)

SAQC: SNP Array Quality Control [PDF]

BMC Bioinformatics, 2011
Background Genome-wide single-nucleotide polymorphism (SNP) arrays containing hundreds of thousands of SNPs from the human genome have proven useful for studying important human genome questions.
Li Ling-Hui, Lin Chien-Wei, Chen Chun-Houh, Kang Meijyh, Lin Hsin-Chi, Yang Hsin-Chou, Wu Jer-Yuarn, Chen Yuan-Tsong, Pan Wen-Harn   +8 more
doaj   +3 more sources

Clinical Utility of SNP Array Analysis in Prenatal Diagnosis: A Cohort Study of 5000 Pregnancies

Frontiers in Genetics, 2020
BackgroundSingle nucleotide polymorphism array (SNP-array) has been introduced for prenatal diagnosis. We aimed to evaluate the clinical value of SNP-array in the diagnosis of fetal chromosomal anomalies.MethodsA retrospective study was conducted on 5000
Jingjing Xiang, Jingjing Xiang, Yang Ding, Yang Ding, Xiaoyan Song, Xiaoyan Song, Jun Mao, Jun Mao, Minjuan Liu, Minjuan Liu, Yinghua Liu, Yinghua Liu, Chao Huang, Chao Huang, Qin Zhang, Qin Zhang, Ting Wang, Ting Wang   +17 more
doaj   +3 more sources

Development and Applications of a High Throughput Genotyping Tool for Polyploid Crops: Single Nucleotide Polymorphism (SNP) Array

Frontiers in Plant Science, 2018
Polypoid species play significant roles in agriculture and food production. Many crop species are polyploid, such as potato, wheat, strawberry, and sugarcane.
Qian You, Qian You, Xiping Yang, Ze Peng, Liping Xu, Jianping Wang, Jianping Wang, Jianping Wang   +7 more
doaj   +3 more sources

Development and validation of high-density SNP array for genomic studies in Indian yak populations [PDF]

BMC Genomic Data
Background Yaks are multipurpose ruminants crucial for milk, meat, wool, fuel, and high-altitude transportation. Effective management of their genetic resources requires detailed knowledge of their genetic diversity, population structure, and ...
Amod Kumar, Mahesh Dige, Reena Arora, Saket Kumar Niranjan, Sonika Ahlawat, Rekha Sharma, Aneet Kour, Sheikh Firdous Ahmad, K. N. Raja, Karan Veer Singh, Upasna Sharma, Meenal Raheja, Anita Kumari Garsa, Vandana Dureja, Mehak Maggon, Seema Yadav, Kanika Popli, Ramesh Kumar Vijh   +17 more
doaj   +2 more sources

Evaluation and management of DMD gene copy number variations detected by prenatal SNP-array testing [PDF]

BMC Medical Genomics
Objective This study aims to evaluate the clinical management of incidental findings of copy number variations (CNVs) in the DMD gene detected through prenatal single nucleotide polymorphism array (SNP-array).
Jiancheng Hu, Jialun Pang, Rong Hu, Lin Zhou, Wenxian Yu, Hui Xi, Yingchun Luo, Shuting Yang, Wanglan Tang, Ai Hu, Jing Chen, Ying Peng   +11 more
doaj   +2 more sources

Development and Validation of an Open Access SNP Array for Nile Tilapia (Oreochromis niloticus)

G3: Genes, Genomes, Genetics, 2020
Tilapia are among the most important farmed fish species worldwide, and are fundamental for the food security of many developing countries. Several genetically improved Nile tilapia (Oreochromis niloticus) strains exist, such as the iconic Genetically ...
Carolina Peñaloza, Diego Robledo, Agustin Barría, Trọng Quốc Trịnh, Mahirah Mahmuddin, Pamela Wiener, John A. H. Benzie, Ross D. Houston   +7 more
doaj   +3 more sources

Fine-scale assessment of ROH patterns and genomic inbreeding in diverse horse breeds using two SNP array densities [PDF]

BMC Veterinary Research
Background Inbreeding is caused by mating between related individuals and is associated with reduced fitness and performance. Generally, in the horse population, inbreeding is caused by geographically restricted areas and intensive natural or artificial ...
Moslem Moghbeli Damane, Ahmad Ayatollahi Mehrgardi, Ali Esmailizadeh, Mehdi Momen   +3 more
doaj   +2 more sources

Accuracy of genotype imputation of a low-density SNP array for the Amazon fish Colossoma macropomum [PDF]

Genetics and Molecular Biology
In South America, Tambaqui (Colossoma macropomum) stands as the primary target for aquaculture, yet breeding programs for this Amazon native species are in their early stages. While high-density single nucleotide polymorphism (SNP) arrays are pivotal for
John F. G. Agudelo, Vito A. Mastrochirico-Filho, Baltasar F. Garcia, Raquel B. Ariede, José M. Yáñez, Gustavo M. R. Valladão, Diogo T. Hashimoto   +6 more
doaj   +2 more sources

An Axiom SNP genotyping array for Douglas-fir [PDF]

BMC Genomics, 2020
Background In forest trees, genetic markers have been used to understand the genetic architecture of natural populations, identify quantitative trait loci, infer gene function, and enhance tree breeding.
Glenn T. Howe, Keith Jayawickrama, Scott E. Kolpak, Jennifer Kling, Matt Trappe, Valerie Hipkins, Terrance Ye, Stephanie Guida, Richard Cronn, Samuel A. Cushman, Susan McEvoy   +10 more
doaj   +3 more sources

Assessing the clinical application value of SNP-array in fetal central nervous system malformations [PDF]

Human Genomics
Background Single nucleotide polymorphism array (SNP-array) has been introduced for prenatal diagnosis. This study aims to evaluate the clinical utility of SNP-array in the prenatal central nervous system (CNS) malformations.
Wei Li, Jiasun Su, Weiliang Lu, Xianglian Tang, Chaofan Zhou, Yueyun Lan, Yuan Wei, Limei Huang, Jingrong Luo, Shan Ou, Shuyin Tan, Shengkai Wei, Yaoyao Jiang, Jingyu Su, Liang Wang, Minpan Huang, Jingsi Luo, Peng Huang   +17 more
doaj   +2 more sources