Results 21 to 30 of about 75,225 (256)

Comparison of sequencing-based and array-based genotyping platforms for genomic prediction of maize hybrid performance

open access: yesCrop Journal, 2023
Genomic selection (GS) is a powerful tool for improving genetic gain in maize breeding. However, its routine application in large-scale breeding pipelines is limited by the high cost of genotyping platforms.
Guangning Yu   +12 more
doaj   +1 more source

SNP Arrays [PDF]

open access: yesMicroarrays, 2016
The papers published in this Special Issue “SNP arrays” (Single Nucleotide Polymorphism Arrays) focus on several perspectives associated with arrays of this type. The range of papers vary from a case report to reviews, thereby targeting wider audiences working in this field. The research focus of SNP arrays is often human cancers but this Issue expands
openaire   +2 more sources

The inconsistency between two major aneuploidy-screening platforms—single-nucleotide polymorphism array and next-generation sequencing—in the detection of embryo mosaicism

open access: yesBMC Genomics, 2022
Background In preimplantation genetic testing for aneuploidy (PGT-A), appropriate evaluation of mosaic embryos is important because of the adverse implications of transferring embryos with high-level mosaicism or discarding those with low-level mosaicism.
Dongjia Chen   +13 more
doaj   +1 more source

A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays [PDF]

open access: yesBioinformatics, 2007
AbstractMotivation: Modern strategies for mapping disease loci require efficient genotyping of a large number of known polymorphic sites in the genome. The sensitive and high-throughput nature of hybridization-based DNA microarray technology provides an ideal platform for such an application by interrogating up to hundreds of thousands of single ...
Yuanyuan Xiao   +3 more
openaire   +3 more sources

Genetic analysis of products of conception using a HLPA/SNP-array strategy

open access: yesMolecular Cytogenetics, 2019
Background Fetal chromosomal abnormalities was the most frequent cause of miscarriage, and the traditional testing method G-banded karyotyping has limitations.
Jun Mao   +6 more
doaj   +1 more source

Identification of Pyrus single nucleotide polymorphisms (SNPs) and evaluation for genetic mapping in European pear and interspecific Pyrus hybrids. [PDF]

open access: yesPLoS ONE, 2013
We have used new generation sequencing (NGS) technologies to identify single nucleotide polymorphism (SNP) markers from three European pear (Pyrus communis L.) cultivars and subsequently developed a subset of 1096 pear SNPs into high throughput markers ...
Sara Montanari   +17 more
doaj   +1 more source

Comparing CNV detection methods for SNP arrays [PDF]

open access: yesBriefings in Functional Genomics and Proteomics, 2009
Data from whole genome association studies can now be used for dual purposes, genotyping and copy number detection. In this review we discuss some of the methods for using SNP data to detect copy number events. We examine a number of algorithms designed to detect copy number changes through the use of signal-intensity data and consider methods to ...
Winchester, L, Yau, C, Ragoussis, J
openaire   +2 more sources

The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies [PDF]

open access: yesScientific Reports, 2020
AbstractCherry breeding and genetic studies can benefit from genome-wide genetic marker assays. Currently, a 6K SNP array enables genome scans in cherry; however, only a third of these SNPs are informative, with low coverage in many genomic regions.
Vanderzande, Stijn   +7 more
openaire   +2 more sources

The advantages of SNP arrays over CGH arrays [PDF]

open access: yesMolecular Cytogenetics, 2014
In recent years, with the rapid development of Chromosomal Micro-array Analysis (CMA), the resolution limit of 5Mb which was imposed by conventional cytogenetics, has been significantly lowered. Currently, array CGH is the most widely used CMA technology.
openaire   +2 more sources

SNPs ANALYSIS AS A TOOL IN MOLECULAR GENETICS DIAGNOSTICS

open access: yesMajalah Kedokteran Andalas, 2015
AbstrakSingle Nucleotide Polymorphism (SNP) merupakan variasi genetik yang ditemukan pada lebih dari 1% populasi. Haplotipe, yang merupakan sekelompok SNP atau alel dalam satu kromosom, dapat di turunkan ke generasi selanjutnya dan dapat digunakan untuk ...
Dewi Rusnita
doaj   +1 more source

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