Results 11 to 20 of about 75,225 (256)
A new chicken 55K SNP genotyping array [PDF]
BMC Genomics, 2019 Background China has the richest local chicken breeding resources in the world and is the world’s second largest producer of meat-type chickens. Development of a moderate-density SNP array for genetic analysis of chickens and breeding of meat-type ...
Ranran Liu +8 more
doaj +3 more sources
A SNP Genotyping Array for Hexaploid Oat
The Plant Genome, 2014 Recognizing a need in cultivated hexaploid oat ( L.) for a reliable set of reference single nucleotide polymorphisms (SNPs), we have developed a 6000 (6K) BeadChip design containing 257 Infinium I and 5486 Infinium II designs corresponding to 5743 SNPs ...
Nicholas A. Tinker +9 more
doaj +2 more sources
Deducing genotypes for loci of interest from SNP array data via haplotype sharing, demonstrated for apple and cherry. [PDF]
PLoS ONE, 2023 Breeders, collection curators, and other germplasm users require genetic information, both genome-wide and locus-specific, to effectively manage their genetically diverse plant material.
Alexander Schaller +2 more
doaj +2 more sources
SNP+ to predict dropout rates in SNP arrays
Conservation Genetics Resources, 2022 Abstract Genotyping individuals using forensic or non-invasive samples such as hair or fecal samples increases the risk of allelic amplification failure (dropout) due to the low quality and quantity of DNA. One way to decrease genotyping errors is to increase the number of replicates per sample.
Sastre Alaiz, Natalia +2 more
openaire +3 more sources
TAFFYS: An Integrated Tool for Comprehensive Analysis of Genomic Aberrations in Tumor Samples. [PDF]
PLoS ONE, 2015 Tumor single nucleotide polymorphism (SNP) array is a common platform for investigating the cancer genomic aberration and the functionally important altered genes.
Yuanning Liu +3 more
doaj +1 more source
Detection rates of abnormalities in over 10,000 amniotic fluid samples at a single laboratory
BMC Pregnancy and Childbirth, 2023 Background A growing number of cytogenetic techniques have been used for prenatal diagnosis. This study aimed to demonstrate the usefulness of karyotyping, BACs-on-Beads (BoBs) assay and single nucleotide polymorphism (SNP) array in prenatal diagnosis ...
Sha Lu +8 more
doaj +1 more source
Frontiers in Plant Science, 2021 Array-based single nucleotide polymorphism (SNP) genotyping platforms have low genotype error and missing data rates compared to genotyping-by-sequencing technologies.
Gabriel Keeble-Gagnère +14 more
doaj +1 more source
SNP Array in Hematopoietic Neoplasms: A Review [PDF]
Microarrays, 2015 Cytogenetic analysis is essential for the diagnosis and prognosis of hematopoietic neoplasms in current clinical practice. Many hematopoietic malignancies are characterized by structural chromosomal abnormalities such as specific translocations, inversions, deletions and/or numerical abnormalities that can be identified by karyotype analysis or ...
Song, Jinming, Shao, Haipeng
openaire +2 more sources
BMC Genomics, 2021 Background Single nucleotide polymorphism (SNP) array technology has been increasingly used to generate large quantities of SNP data for use in genetic studies.
Nicholas P. Howard +7 more
doaj +1 more source
How array design creates SNP ascertainment bias. [PDF]
PLoS ONE, 2021 Single nucleotide polymorphisms (SNPs), genotyped with arrays, have become a widely used marker type in population genetic analyses over the last 10 years.
Johannes Geibel +5 more
doaj +1 more source