Results 91 to 100 of about 912,053 (206)

SNP-SNP interaction models identified by the GMDR method with adjustment for age, gender, and education.

, 2017
SNP-SNP interaction models identified by the GMDR method with adjustment for age, gender, and education.
Chung-Feng Kao (104445), Po-Hsiu Kuo (104448), Yu-Li Liu (175348), Shih-Jen Tsai (160992), Albert C. Yang (222158), Eugene Lin (759907), Cheng-Hung Yang (3772732)   +6 more
core   +1 more source

A 3K Axiom SNP array from a transcriptome-wide SNP resource sheds new light on the genetic diversity and structure of the iconic subtropical conifer tree Araucaria angustifolia (Bert.) Kuntze.

PLoS ONE, 2020
High-throughput SNP genotyping has become a precondition to move to higher precision and wider genome coverage genetic analysis of natural and breeding populations of non-model species.
Pedro Italo T Silva, Orzenil B Silva-Junior, Lucileide V Resende, Valderes A Sousa, Ananda V Aguiar, Dario Grattapaglia   +5 more
doaj   +1 more source

Day 7: SNP arrays

, 2016
Slides from: Practical course in microarray data analysisKI ...
openaire   +1 more source

SNP ARRAY NEXUS BIODISCOVERY DATA

, 2019
Data output from SNP Array analyses in Nexus Copy Number v7.5 (BioDiscovery, Inc.). Data per sample includes: Calls.txt; call thresholds.txt; descriptor set; probes.ivg; raw_snps.text; raw.txt; segments.ivg; setting.xmle; snps.ivg; snpsegments.ivg ...
Keith Hunter (8030276), Nalin Thakker (4669930), Elliot, Louise, Higgins, Catherine, Louise Elliot (8030258), Badescu, Dunarel, Parkinson, Eric Kenneth, Lynne Hampson (303948), Robert Woodwards (8030270), Woodwards, Robert, Stephen Prime (8030273), Prime, Stephen, Janet M. Risk (8030261), Hampson, Ian, Thakker, Nalin, Hunter, Keith, Veeramachaneni, Ratna, Ragoussis, Jiannis, Timothée Revil (8030246), Ian Hampson (8030264), Liloglou, Triantafillos, Thomas Walker (81255), Jiannis Ragoussis (16749), Triantafillos Liloglou (30690), Dearden, Simon, Ratna Veeramachaneni (571143), Catherine Higgins (2947584), Walker, Thomas, Shaw, Richard, Dunarel Badescu (8030252), Eric Kenneth Parkinson (1355847), Revil, Timothée, Risk, Janet M., Hampson, Lynne, Richard Shaw (3551015), De Weck, Antoine, Simon Dearden (8030267), O'Sullivan, James, Antoine De Weck (8030249), James O'Sullivan (8030255)   +39 more
core   +1 more source

Developing a 670k genotyping array to tag ~2M SNPs across 24 horse breeds

BMC Genomics, 2017
Background To date, genome-scale analyses in the domestic horse have been limited by suboptimal single nucleotide polymorphism (SNP) density and uneven genomic coverage of the current SNP genotyping arrays.
Robert J. Schaefer, Mikkel Schubert, Ernest Bailey, Danika L. Bannasch, Eric Barrey, Gila Kahila Bar-Gal, Gottfried Brem, Samantha A. Brooks, Ottmar Distl, Ruedi Fries, Carrie J. Finno, Vinzenz Gerber, Bianca Haase, Vidhya Jagannathan, Ted Kalbfleisch, Tosso Leeb, Gabriella Lindgren, Maria Susana Lopes, Núria Mach, Artur da Câmara Machado, James N. MacLeod, Annette McCoy, Julia Metzger, Cecilia Penedo, Sagi Polani, Stefan Rieder, Imke Tammen, Jens Tetens, Georg Thaller, Andrea Verini-Supplizi, Claire M. Wade, Barbara Wallner, Ludovic Orlando, James R. Mickelson, Molly E. McCue   +34 more
doaj   +1 more source

PPTC PDX SNP array files

, 2019
Data deposited here have origins through the National Cancer Institute Pediatric Preclinical Testing Consortion (NCI PPTC) and Alex's Lemonade Stand Foundation. SNP array BAF/LRR text files, GC correction file, Nexus sample upload file, segmentation file.
Jo Lynne Rokita (5706383), Laura Ritenour (5850944)   +1 more
core   +1 more source

Development and validation of a high density SNP genotyping array for Atlantic salmon (Salmo salar) [PDF]

, 2014
BackgroundDense single nucleotide polymorphism (SNP) genotyping arrays provide extensive information on polymorphic variation across the genome of species of interest.
Bron, James E, Talbot, Richard, Cezard, Timothé, Bron, James, Lowe, Natalie R, Penman, David, Brew, Fiona, Hamilton, Alastair, Houston, Ross D, Bekaert, Michaël, Archibald, Alan L, Taggart, John B, Bishop, Stephen C, Gharbi, Karim, Taggart, John, Downing, Alison, Talbot, Richard T, Tinch, Alan E, Davassi, Alessandro, Penman, David J   +19 more
core   +1 more source

SNP-based genomic scans.

, 2023
These scans are similar to the heterozygosity-based analysis (Figs 4 and S9), but focusing on biallelic SNP changes (rather than accession-based frequencies).
Urszula Kania (16877777), Maaike de Jong (3161322), Sally Ward (766318), Ottoline Leyser (25869), Liron Shenhav (6845174), Hugo Tavares (7411373), Raj K. Pasam (7411376), Anne Readshaw (9231296), Hayley McCulloch (16877780), Elizabeth Forsyth (16877783)   +9 more
core   +1 more source

Similarity Measures for Clustering SNP Data [PDF]

The issue of suitable similarity measures for a particular kind of genetic data – so called SNP data – arises from the GENICA (Interdisciplinary Study Group on Gene Environment Interaction and Breast Cancer in Germany) case-control study of sporadic ...
Ickstadt, Katja, Selinski, Silvia
core  

SNP-SNP entropy-based interaction network of 11 ERAP1 SNPs in 748 Iranian BD patients.

, 2020
SNP-SNP entropy-based interaction network of 11 ERAP1 SNPs in 748 Iranian BD patients.
Parisa Riahi (8407764), Ali Javinani (5922311), Shayan Mostafaei (5478275), Akira Meguro (157086), Farhad Shahram (5478272), Amir Ashraf-Ganjouei (5500931), Anoshirvan Kazemnejad (6679151), Mahdi Mahmoudi (836542), Nobuhisa Mizuki (46911), Seyedeh Tahereh Faezi (8407767)   +9 more
core   +1 more source