Results 11 to 20 of about 912,053 (206)
How array design creates SNP ascertainment bias. [PDF]
PLoS ONE, 2021 Single nucleotide polymorphisms (SNPs), genotyped with arrays, have become a widely used marker type in population genetic analyses over the last 10 years.
Johannes Geibel +5 more
doaj +4 more sources
SNPConvert: SNP Array Standardization and Integration in Livestock Species [PDF]
Microarrays, 2016 One of the main advantages of single nucleotide polymorphism (SNP) array technology is providing genotype calls for a specific number of SNP markers at a relatively low cost. Since its first application in animal genetics, the number of available SNP arrays for each species has been constantly increasing.
Nicolazzi, Ezequiel +2 more
openaire +3 more sources
Detection rates of abnormalities in over 10,000 amniotic fluid samples at a single laboratory
BMC Pregnancy and Childbirth, 2023 Background A growing number of cytogenetic techniques have been used for prenatal diagnosis. This study aimed to demonstrate the usefulness of karyotyping, BACs-on-Beads (BoBs) assay and single nucleotide polymorphism (SNP) array in prenatal diagnosis ...
Sha Lu +8 more
doaj +1 more source
SNP Array in Hematopoietic Neoplasms: A Review [PDF]
Microarrays, 2015 Cytogenetic analysis is essential for the diagnosis and prognosis of hematopoietic neoplasms in current clinical practice. Many hematopoietic malignancies are characterized by structural chromosomal abnormalities such as specific translocations, inversions, deletions and/or numerical abnormalities that can be identified by karyotype analysis or ...
Song, Jinming, Shao, Haipeng
openaire +2 more sources
The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies [PDF]
Scientific Reports, 2020 AbstractCherry breeding and genetic studies can benefit from genome-wide genetic marker assays. Currently, a 6K SNP array enables genome scans in cherry; however, only a third of these SNPs are informative, with low coverage in many genomic regions.
Vanderzande, Stijn +7 more
openaire +2 more sources
Frontiers in Plant Science, 2021 Array-based single nucleotide polymorphism (SNP) genotyping platforms have low genotype error and missing data rates compared to genotyping-by-sequencing technologies.
Gabriel Keeble-Gagnère +14 more
doaj +1 more source
Comparing CNV detection methods for SNP arrays [PDF]
Briefings in Functional Genomics and Proteomics, 2009 Data from whole genome association studies can now be used for dual purposes, genotyping and copy number detection. In this review we discuss some of the methods for using SNP data to detect copy number events. We examine a number of algorithms designed to detect copy number changes through the use of signal-intensity data and consider methods to ...
Winchester, L, Yau, C, Ragoussis, J
openaire +2 more sources
SNP+ to predict dropout rates in SNP arrays
Conservation Genetics Resources, 2022 Abstract Genotyping individuals using forensic or non-invasive samples such as hair or fecal samples increases the risk of allelic amplification failure (dropout) due to the low quality and quantity of DNA. One way to decrease genotyping errors is to increase the number of replicates per sample.
Sastre Alaiz, Natalia +2 more
openaire +3 more sources
BMC Genomics, 2021 Background Single nucleotide polymorphism (SNP) array technology has been increasingly used to generate large quantities of SNP data for use in genetic studies.
Nicholas P. Howard +7 more
doaj +1 more source
Microarrays, 2016 The papers published in this Special Issue “SNP arrays” (Single Nucleotide Polymorphism Arrays) focus on several perspectives associated with arrays of this type. The range of papers vary from a case report to reviews, thereby targeting wider audiences working in this field. The research focus of SNP arrays is often human cancers but this Issue expands
openaire +2 more sources