Prediction and replication from case-control sequencing studies using custom genotyping and additional sequencing [PDF]
We present two results about using allele-count (AC) burdens of rare SNPs discovered in a case-control sequencing study for prediction or validation in an external prospective study. When genotyping only the SNPs polymorphic in the sequence data, the phenotype to AC correlation tends to be larger in the replication data than the primary study ...
arxiv
Harnessing Photo‐Energy Conversion in Nanomaterials for Precision Theranostics
Harnessing photo‐energy conversion in nanomaterials enables precision theranostics through light‐driven mechanisms such as photoluminescence, photothermal, photoelectric, photoacoustic, photo‐triggered surface‐enhanced Raman scattering (SERS), and photodynamic processes. This review explores six fundamental principles of photo‐energy conversion, recent
Jingyu Shi+4 more
wiley +1 more source
Single nucleotide polymorphisms in the CDH18 gene affect growth traits in Hu sheep
Abstract Growth traits are critical economic traits in sheep. Genetic polymorphism has a great influence on the improvement of sheep traits. The aim of this study was to analyze the effect of cadherin 18 (CDH18) gene polymorphisms on growth traits in Hu sheep.
Tianyi Liu+5 more
wiley +1 more source
Deep Learning Classification of Polygenic Obesity using Genome Wide Association Study SNPs [PDF]
In this paper, association results from genome-wide association studies (GWAS) are combined with a deep learning framework to test the predictive capacity of statistically significant single nucleotide polymorphism (SNPs) associated with obesity phenotype.
arxiv
MMP-2 geno-phenotype is prognostic for colorectal cancer survival, whereas MMP-9 is not. [PDF]
The prognostic significance of single-nucleotide polymorphisms (SNPs) and tumour protein levels of MMP-2 and MMP-9 was evaluated in 215 colorectal cancer patients.
Hawinkels, LJAC+8 more
core +2 more sources
Modification and Patterning of Thiolate‐Anchored Self‐Assembled Monolayers with UV Light
This paper reviews the relevant work regarding the modification and patterning of thiolate‐anchored self‐assembled monolayers with UV light. Performed alone or in combination with a subsequent exchange reaction, introducing specific molecular substituents, this approach enables the preparation of functional binary SAMs and the creation of complex ...
Michael Zharnikov, Andreas Terfort
wiley +1 more source
Are Silicon Nanoparticles an Interstellar Dust Component? [PDF]
Silicon nanoparticles (SNPs) have been proposed as the source of the observed "extended red emission" (ERE) from interstellar dust. We calculate the thermal emission expected from such particles in a reflection nebula such as NGC 2023, and in the diffuse interstellar medium (ISM). Pure neutral Si SNPs would emit at 16.4 micron (um), while Si/SiO2 SNPs (
arxiv
Genome-wide association studies of inflammatory bowel disease in German shepherd dogs [PDF]
Canine Inflammatory Bowel Disease (IBD) is considered a multifactorial disease caused by complex interactions between the intestinal immune system, intestinal microbiota and environmental factors in genetically susceptible individuals.
Allenspach, Karin+7 more
core +5 more sources
This study constructs a stacked multimodal machine learning model for nonalcoholic fattly liver disease (NAFLD) by integrating genetic and clinical features, and synthesize an in‐silico quantitative marker (ISNLD) that enables personalized risk stratification for intrahepatic and extrahepatic outcomes of high‐risk individuals of NAFLD.
Lushan Xiao+14 more
wiley +1 more source
Detecting SNPs with interactive effects on a quantitative trait [PDF]
Here we propose a test to detect effects of single nucleotide polymorphisms (SNPs) on a quantitative trait. Significant SNP-SNP interactions are more difficult to detect than significant SNPs, partly due to the massive amount of SNP-SNP combinations. We propose to move away from testing interaction terms, and move towards testing whether an individual ...
arxiv