Results 31 to 40 of about 375,450 (258)

Genome wide SNP discovery, analysis and evaluation in mallard (Anas platyrhynchos) [PDF]

, 2011
Background Next generation sequencing technologies allow to obtain at low cost the genomic sequence information that currently lacks for most economically and ecologically important organisms. For the mallard duck genomic data is limited. The mallard is,
Kerstens Hindrik HD, van Hooft, W.F., van der Poel, J.J., Prins, Herbert HT, Robert HS Kraus, van Hooft, Pim, Kraus, R.H.S., Prins, Herbert H. T., Prins, H.H.T., Poel, J., Van Hooft Pim, Hooft, Pim Van, Li Ning, Jan J Van Der Poel, Johan Elmberg, Huang Yinhua, Prins Herbert HT, Elmberg, Johan, Vignal Alain, Martien AM Groenen, Crooijmans, Richard P. M. A., Elmberg Johan, Groenen, M.A.M., van Hooft, Pim,, Van Der Poel Jan J, Huang, Y., Kraus, Robert Hs, Pim Van Hooft, Vignal, Alain, Crooijmans, R.P.M.A., Yinhua Huang, Groenen, Martien A. M., Vignal, Alain,, Li, N., Crooijmans, R., Kerstens, H., Crooijmans, Richard P. M. A.,, Herbert HT Prins, Elmberg, J., Groenen, M., Kerstens, Hindrik HD, Elmberg, Johan,, Kraus, Robert, Groenen, Martien AM, Prins, Herbert H. T.,, Kraus Robert HS, Prins, H., Huang, Yinhua,, Groenen Martien AM, Poel, J.J., van der, Kersten, H.H.D., van der Poel, Jan J., Li, Ning, Kraus, Robert H. S.,, Kraus, Robert H. S., Huang, Yinhua, Hooft, W.F., van, Crooijmans, Richard PMA, Kerstens, Hindrik H. D.,, Kerstens, Hindrik H. D., Li, Ning,, Hooft, P., Hindrik HD Kerstens, Richard PMA Crooijmans, Vignal, A., Alain Vignal, Kraus, R., Groenen, Martien A. M.,, Ning Li, Crooijmans Richard PMA, van der Poel, Jan J.,   +70 more
core   +1 more source

SKM-SNP: SNP markers detection method

Journal of Biomedical Informatics, 2010
SKM-SNP, SNP markers detection program, is proposed to identify a set of relevant SNPs for the association between a disease and multiple marker genotypes. We employ a subspace categorical clustering algorithm to compute a weight for each SNP in the group of patient samples and the group of normal samples, and use the weights to identify the subsets of
Yang Liu 0100, Mark Junjie Li, Yiu-ming Cheung, Pak Chung Sham, Michael K. Ng 0001   +4 more
openaire   +4 more sources

SNP-index information of the three markers. [PDF]

, 2016
SNP-index information of the three markers.
Yuanjun Ye (2872955), Ming Cai (342151), Huitang Pan (395889), Lu Feng (193271), Yiqian Ju (2872961), Qixiang Zhang (395887), Yao Jiao (2872958), Tangren Cheng (395888)   +7 more
core   +1 more source

When is an SNP not an SNP?

BioTechniques
Genomic duplications are important sources of structural change and gene innovation. In humans, the most recent and highly identical sequences (>90% homology, >1 kb long) are known as segmental duplications (SDs). Single-nucleotide variants or single-nucleotide polymorphisms within SDs have not been systematically assessed due to limitations around ...
Shapour Jalilzadeh, Valerie Walker, Gary P Leggatt, Eli Hatchwell   +3 more
openaire   +3 more sources

Hyperosmotic stress induces PARP1‐mediated HPF1‐dependent mono(ADP‐ribosyl)ation

FEBS Letters, EarlyView.
Sorbitol‐induced hyperosmotic stress rapidly induces reversible mono(ADP‐ribosyl)ation (MARylation) on PARP1 without the signs of genotoxic signaling. We show that PARP1 autoMARylation is HPF1 dependent and forms hydroxylamine‐resistant O‐glycosidic linkages.
Anna Georgina Kopasz, Mihály Mérey, Rebeka Vásárhelyi, Ramóna Pék, Victor Imburchia, László Henn, Adrián Kószó, Nicholas D. Lakin, Ivan Ahel, Sébastien Huet, Ágnes Czibula, Gyula Timinszky   +11 more
wiley   +1 more source

SNP-gene-pathway network. [PDF]

, 2018
The network displays 580 SNPs (green diamonds) located in the selected region for 365 genes (circles) present in 117 pathway clusters (blue squares). Black symbols indicate genes with ten or more connections to pathway clusters, and triangles indicate ...
Tom Hooimeijer (5058752), Elisa Cirillo (5058758), Susan L. Coort (493712), Manuel Gonzalez Hernandez (5058755), Laurence D. Parnell (158888), Martina Kutmon (99935), Chris T. Evelo (117440), Michiel E. Adriaens (117425), Lars M. T. Eijssen (117447)   +8 more
core   +1 more source

Three phosphatase families form a community: The phosphohydrolases that act upon inositol pyrophosphates

FEBS Letters, EarlyView.
Inositol pyrophosphates are energy‐rich signaling molecules that perform critical functions in cells. Three different families of phosphatases hydrolyze the β phosphate of the inositol pyrophosphate molecules: two have narrow specificities and one is promiscuous.
Ronda J. Rolfes
wiley   +1 more source

SNP-specific genotype frequencies for cases (YWC) and controls (CGEMS). [PDF]

, 2019
SNP-specific genotype frequencies for cases (YWC) and controls (CGEMS).
Bryce G. Larson (6733730), Penelope Miron (171974), Laura C. Collins (416928), Kathryn J. Ruddy (5391302), Elena Brachtel (5044052), Meghan E. Meyer (6733727), Virginia Borges (5809064), Qiyuan Li (236147), Ji-Heui Seo (6733733), Hilde Vardeh (2922144), Michelle Rath (6733721), Mark Pomerantz (260848), Matthew Freedman (23592), Rulla M. Tamimi (437781), Anne E. Dowton (6733724), Lidia Schapira (549257), Sara Lindström (120789), Alexander Miron (28179), Ann H. Partridge (5249723), Huili Li (357603), Steven E. Come (416933)   +20 more
core   +1 more source

Design and analysis strategies for robust microbiome ageing research

FEBS Letters, EarlyView.
The gut microbiome changes with age and associates with age‐related morbidity and mortality, establishing it as a potential biomarker and intervention target for ageing. Realising this potential requires methodological rigour, yet distinguishing biological signals from methodological artefacts remains challenging across cohorts. This review provides an
Mark Olenik, İsmail Güderer, Yi Wang, Tayyaba Alvi, Prasoon Pandey, Handan Melike Dönertaş   +5 more
wiley   +1 more source

ngs-snp-pipeline-v3.2 [PDF]

, 2012
nuclear locus assembly and SNP discovery pipeline R ...
Peter H. Dutton (163010), Amy Frey (3261387), Archer, Frederick I., Hancock-Hanser, Brittany, Phillip A. Morin (198405), Frederick I. Archer (198398), Leslie, Matthew S., Dutton, Peter H., Matthew S. Leslie (370104), Morin, Phillip A., Brittany Hancock-Hanser (178889), Frey, Amy   +11 more
core   +1 more source