Results 51 to 60 of about 1,566,477 (261)

Development and validation of a 20K single nucleotide polymorphism (SNP) whole genome genotyping array for apple (Malus × domestica Borkh). [PDF]

open access: yesPLoS ONE, 2014
High-density SNP arrays for genome-wide assessment of allelic variation have made high resolution genetic characterization of crop germplasm feasible. A medium density array for apple, the IRSC 8K SNP array, has been successfully developed and used for ...
Luca Bianco   +14 more
doaj   +1 more source

A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP) array

open access: yesBMC Bioinformatics, 2007
Background DNA copy number aberration (CNA) is one of the key characteristics of cancer cells. Recent studies demonstrated the feasibility of utilizing high density single nucleotide polymorphism (SNP) genotyping arrays to detect CNA.
Bailey Dione K   +8 more
doaj   +1 more source

High-Density Genotypes of Inbred Mouse Strains: Improved Power and Precision of Association Mapping. [PDF]

open access: yes, 2015
Human genome-wide association studies have identified thousands of loci associated with disease phenotypes. Genome-wide association studies also have become feasible using rodent models and these have some important advantages over human studies ...
Churchill, Gary A   +6 more
core   +1 more source

Genome-wide association study in two cohorts from a multi-generational mouse advanced intercross line highlights the difficulty of replication due to study-specific heterogeneity [PDF]

open access: yes, 2020
There has been extensive discussion of the Replication Crisis in many fields, including genome-wide association studies
Cheng, Riyan   +7 more
core   +2 more sources

Localization of adaptive variants in human genomes using averaged one-dependence estimation. [PDF]

open access: yes, 2018
Statistical methods for identifying adaptive mutations from population genetic data face several obstacles: assessing the significance of genomic outliers, integrating correlated measures of selection into one analytic framework, and distinguishing ...
Atkinson, Elizabeth G   +5 more
core   +3 more sources

Genome-wide association studies of inflammatory bowel disease in German shepherd dogs [PDF]

open access: yes, 2018
Canine Inflammatory Bowel Disease (IBD) is considered a multifactorial disease caused by complex interactions between the intestinal immune system, intestinal microbiota and environmental factors in genetically susceptible individuals.
Allenspach, Karin   +7 more
core   +5 more sources

High concordance between next-generation sequencing and single-nucleotide polymorphism array in preimplantation genetic testing for aneuploidy

open access: yesClinical and Experimental Obstetrics & Gynecology, 2022
Background: This study aimed to compare the use of next-generation sequencing (NGS) and single-nucleotide polymorphism (SNP) array in preimplantation genetic testing for aneuploidy (PGT-A) in the same blastocyst.
Zhanhui Ou   +3 more
doaj   +1 more source

Development and Evaluation of a High-Throughput Single-Nucleotide Polymorphism Array for Large Yellow Croaker (Larimichthys crocea)

open access: yesFrontiers in Genetics, 2020
High-density single-nucleotide polymorphism (SNP) genotyping array is an essential tool for genetic analyses of animals and plants. Large yellow croaker (Larimichthys crocea) is one of the most commercially important marine fish species in China ...
Tao Zhou   +15 more
doaj   +1 more source

Tumor Touch Imprints as Source for Whole Genome Analysis of Neuroblastoma Tumors. [PDF]

open access: yesPLoS ONE, 2016
INTRODUCTION:Tumor touch imprints (TTIs) are routinely used for the molecular diagnosis of neuroblastomas by interphase fluorescence in-situ hybridization (I-FISH).
Clemens Brunner   +7 more
doaj   +1 more source

Assessing runs of Homozygosity: a comparison of SNP Array and whole genome sequence low coverage data

open access: yesBMC Genomics, 2017
Runs of Homozygosity (ROH) are genomic regions where identical haplotypes are inherited from each parent. Since their first detection due to technological advances in the late 1990s, ROHs have been shedding light on human population history and ...
F. Ceballos, S. Hazelhurst, M. Ramsay
semanticscholar   +1 more source

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