Results 51 to 60 of about 75,410 (157)

Development of SNP‐genotyping arrays in two shellfish species [PDF]

Molecular Ecology Resources, 2014
AbstractUse of SNPs has been favoured due to their abundance in plant and animal genomes, accompanied by the falling cost and rising throughput capacity for detection and genotyping. Here, we present in vitro (obtained from targeted sequencing) and in silico discovery of SNPs, and the design of medium‐throughput genotyping arrays for two oyster species,
S, Lapègue, E, Harrang, S, Heurtebise, E, Flahauw, C, Donnadieu, P, Gayral, M, Ballenghien, L, Genestout, L, Barbotte, R, Mahla, P, Haffray, C, Klopp   +11 more
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Large SNP arrays for genotyping in crop plants

Journal of Biosciences, 2012
Genotyping with large numbers of molecular markers is now an indispensable tool within plant genetics and breeding. Especially through the identification of large numbers of single nucleotide polymorphism (SNP) markers using the novel high-throughput sequencing technologies, it is now possible to reliably identify many thousands of SNPs at many ...
Martin W, Ganal, Andreas, Polley, Eva-Maria, Graner, Joerg, Plieske, Ralf, Wieseke, Hartmut, Luerssen, Gregor, Durstewitz   +6 more
openaire   +2 more sources

Arrayed Primer Extension in the “Array of Arrays” Format: A Rational Approach for Microarray-Based SNP Genotyping [PDF]

Genetic Testing, 2007
This study provides a new version of the arrayed primer extension (APEX) protocol adapted to the 'array of arrays' platform using an instrumental setup for microarray processing not previously described. The primary aim of the study is to implement a system for rational cost-efficient genotyping where multiple singlenucleotide polymorphisms (SNPs) and ...
Klito, N, Tan, Q, Nyegaard, M, Brusgaard, K, Thomassen, M, Skouboe, C, Dahlgaard, Jesper; id_orcid 0000-0002-1798-6799, Kruse, TA   +7 more
openaire   +3 more sources

Application of single nucleotide polymorphism array (SNP array) derived median copy number state for monitoring the clonal burden of the chromosomal aberrations in myelodysplastic neoplasms

Hematology
Objectives Our study integrates SNP array and metaphase cytogenetics (MC) to decode clonal architecture in myelodysplastic syndromes (MDS) and related disorders.Methods We retrospectively analyzed chromosomal aberrations in 33 patients diagnosed with MDS
Lili Song, Zhenxiu Guo, Kun Chi
doaj   +1 more source

Genetic Diversity and Population Structure in a Vitis spp. Core Collection Investigated by SNP Markers

Diversity, 2020
Single nucleotide polymorphism (SNP) genotyping arrays are powerful tools to measure the level of genetic polymorphism within a population. The coming of next-generation sequencing technologies led to identifying thousands and millions of SNP loci useful
Davide Bianchi, Lucio Brancadoro, Gabriella De Lorenzis   +2 more
doaj   +1 more source

Autozygosity Mapping by Genome-wide Single Nucleotide Polymorphism Array Identifies a Novel Homozygous HR Mutation in a Consanguineous Family with Universal Hereditary Hair Loss

International Journal of Dermatology and Venerology, 2021
. Objective:. Isolated hereditary hypotrichosis is caused by mutations in as many as 11 different genes. The conventional mutation detection strategy consists of sequencing of individual candidate genes separately, a time consuming and costly approach ...
Sirous Zeinali, Leila Youssefian, Hassan Vahidnezhad, Amir Hossein Saeidian, Soheila Sotoudeh, Hamideh Bagherian, Jouni Uitto   +6 more
doaj   +1 more source

Application of Single Nucleotide Polymorphism Microarray in Prenatal Diagnosis of Fetuses with Central Nervous System Abnormalities

International Journal of General Medicine, 2021
Xiaorui Xie, Xiaoqing Wu, Linjuan Su, Meiying Cai, Ying Li, Hailong Huang, Liangpu Xu Medical Genetic Diagnosis and Therapy Center, Fujian Key Laboratory for Prenatal Diagnosis and Birth Defect, Fujian Provincial Maternity and Children’s Hospital ...
Xie X, Wu X, Su L, Cai M, Li Y, Huang H, Xu L   +6 more
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CNV discovery using SNP genotyping arrays

Cytogenetic and Genome Research, 2008
Genome-wide single nucleotide polymorphism (SNP) genotyping platforms have made an important contribution to population genetics and genetic epidemiology. Recently there has been a realisation that these SNP platforms can also be used for typing copy number variants (CNVs).
Yau, C, Holmes, C
openaire   +3 more sources

Large-scale deployment of a rice 6 K SNP array for genetics and breeding applications

Rice, 2017
Background Fixed arrays of single nucleotide polymorphism (SNP) markers have advantages over reduced representation sequencing in their ease of data analysis, consistently higher call rates, and rapid turnaround times.
Michael J. Thomson, Namrata Singh, Maria S. Dwiyanti, Diane R. Wang, Mark H. Wright, Francisco Agosto Perez, Genevieve DeClerck, Joong Hyoun Chin, Geraldine A. Malitic-Layaoen, Venice Margarette Juanillas, Christine J. Dilla-Ermita, Ramil Mauleon, Tobias Kretzschmar, Susan R. McCouch   +13 more
doaj   +1 more source

SNP Array as a Tool for Prenatal Diagnosis of Congenital Heart Disease Screened by Echocardiography: Implications for Precision Assessment of Fetal Prognosis

Risk Management and Healthcare Policy, 2021
Hailong Huang,1,2,* Meiying Cai,1,2,* Yan Wang,1,2 Bin Liang,1,2 Na Lin,1,2 Liangpu Xu1,2 1Center for Prenatal Diagnosis, Fujian Maternity and Child Health Hospital, Affiliated Hospital of Fujian Medical University, Fuzhou 350001, Fujian Province, People&
Huang H, Cai M, Wang Y, Liang B, Lin N, Xu L   +5 more
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