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Robust decomposition of cell type mixtures in spatial transcriptomics
Nature Biotechnology, 2021Dylan Cable +2 more
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Spatial Transcriptomics and In Situ Sequencing to Study Alzheimer’s Disease
Cell, 2020Wei-Ting Chen, Ashley Lu, Benjamin Pavie
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Polony gels enable amplifiable DNA stamping and spatial transcriptomics of chronic pain
Cell, 2022Jane Y Chen +2 more
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Spatial transcriptomics of psoriasis
We performed single cell and spatial transcriptome sequencing of skin tissue from psoriasis patients.openaire +1 more source
Spatial transcriptomics of B cell and T cell receptors reveals lymphocyte clonal dynamics
Science, 2023Camilla Engblom, Kim Thrane, Qirong Lin
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bioRxiv : the preprint server for biology
Spatial transcriptomics (ST) has shown great potential for unraveling the molecular mechanisms of neurodegenerative diseases. However, most existing analyses of ST data focus on bulk or single-cell resolution, overlooking subcellular compartments such as synapses, which are fundamental structures of the brain's neural network. Here we present mcDETECT,
Chenyang, Yuan +13 more
openaire +1 more source
Spatial transcriptomics (ST) has shown great potential for unraveling the molecular mechanisms of neurodegenerative diseases. However, most existing analyses of ST data focus on bulk or single-cell resolution, overlooking subcellular compartments such as synapses, which are fundamental structures of the brain's neural network. Here we present mcDETECT,
Chenyang, Yuan +13 more
openaire +1 more source
Screening cell–cell communication in spatial transcriptomics via collective optimal transport
Nature Methods, 2023Zixuan Cang, Axel Almet, Maksim V Plikus
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