Exploring cell heterogeneity: applications of single-probe single cell mass spectrometry for subpopulation analysis [PDF]
Mass spectrometry (MS) has become an indispensable tool for transformed metabolomics studies, whereas exploring single-cell metabolomic profiles remains a challenge due to limited techniques and suitable algorithms.
Nguyen, Tra
core
Single-Cell Culture in Microwells
In order to better understand cellular processes and behavior, a controlled way of studying high numbers of single cells and their clone formation is greatly needed. This chapter describes a microwell plate with 672 wells in a standard array/slide format,
Lindström, S. +3 more
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Quantitative investigation of calcimimetic R568 on beta cell adhesion and mechanics using AFM single-cell force spectroscopy [PDF]
In this study we use a novel approach to quantitatively investigate mechanical and interfacial properties of clonal β-cells using AFM-Single Cell Force Spectroscopy (SCFS). MIN6 cells were incubated for 48hrs with 0.5mM Ca2+ ± the calcimimetic R568 (1μM).
Younis, Mustafa Y.G. +5 more
core +1 more source
Single-cell electrical characterization
This chapter provides an introduction to single-cell electrical characterization techniques and related devices, which play a key role in the framework of label-free biosensing for diagnostics, drug development, and life science.
Cottet, Jonathan +3 more
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Single-cell states in the estrogen response of breast cancer cell lines [PDF]
Estrogen responsive breast cancer cell lines have been extensively studied to characterize transcriptional patterns in hormone-responsive tumors. Nevertheless, due to current technological limitations, genome-wide studies have typically been limited to ...
Andrea Gamba +49 more
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Single-cell specificity analysis.
A. The Jaccard-Index is used to compare the imputed profiles from SIMPA with the origin human bulk profile used to create a simulated sparse profile and the consensus profile representing the remaining experiments available for the same biosample-target ...
Miguel A. Andrade-Navarro (31443) +3 more
core +1 more source
Single-probe Single Cell Mass Spectrometry Studies: Investigation of Cell Heterogeneity and Quantification of Intracellular Small Molecules [PDF]
Studying cell heterogeneity can provide a deeper understanding of biological activities, but corresponding studies cannot be performed using traditional bulk analysis methods.
Lan, Yunpeng
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DEVELOPMENT AND APPLICATION OF SINGLE CELL MASS SPECTROMETRY TECHNIQUES FOR NON-ADHERENT CELL ANALYSIS [PDF]
Mass spectrometry (MS) analysis of biological samples is traditionally carried out using extractions from large populations of cells, concealing the information from individual cells.
Zhu, Yanlin
core
Single-cell BCR and transcriptome analysis after influenza infection reveals spatiotemporal dynamics of antigen-specific B cells [PDF]
B cell responses are critical for antiviral immunity. However, a comprehensive picture of antigen-specific B cell differentiation, clonal proliferation, and dynamics in different organs after infection is lacking. Here, by combining single-cell RNA and B
Greiff, Victor, +48 more
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Stephenson Covid-19 PBMC 2021 TCR
Dataset published by Stephenson et al. 2021, which contains transcriptome sequencing for over 750,000 Peripheral Blood Mononuclear Cells (PBMC) from 130 patients in the context of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) The dataset ...
Single-cell best practices (14656733)
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