Results 61 to 70 of about 2,160,464 (190)

Stable-Isotope Probing RNA to Study Plant/Fungus Interactions

, 2016
International audienceThe use of stable-isotope probing (SIP) allows tracing specific labeled substrates into fungi leading to a better understanding of their role in biogeochemical cycles and their relationship with their environment.
Amandine Lê Van, Vandenkoornhuyse, Philippe, Duhamel, Marie, Philippe Vandenkoornhuyse, Lê Van, Amandine, Quaiser, Achim, Achim Quaiser, Marie Duhamel   +7 more
core   +1 more source

A culture-independent approach to unravel uncultured bacteria and functional genes in a complex microbial community [PDF]

, 2012
Most microorganisms in nature are uncultured with unknown functionality. Sequence-based metagenomics alone answers 'who/what are there?' but not 'what are they doing and who is doing it and how?'.
Zhou, Q., Kalin, Robert M, Xu, Jian, Wang Yun, Huang, Wei E, Stephen Rolfe, Huang Wei E., Rolfe, Stephen A., Rolfe Stephen, Kang Ning, Huang Shi, Kalin, Robert M., Kalin, R.M., Robert M Kalin, Kalin Robert M., Xu, J., Huang, Shi, Yin Chen, Xu Jian, Shi Huang, Chen Yin, Chen, Y., Huang, S., Jian Xu (31545), Ning, Kang, Wei E. Huang (125868), Yin Chen (125855), Rolfe, Stephen, Yun Wang (32846), Qian Zhou, Jian Xu, Wei E Huang, Yun Wang, Ning, K., Chen, Yin, Zhou, Qian, Huang, W.E., Huang, Wei E., Stephen Rolfe (125866), Ning Kang, Shi Huang (125861), Wang, Yun, Wang, Y., Rolfe, S., Zhou Qian, Kang Ning (59789), Robert M. Kalin (125864), Qian Zhou (125859)   +47 more
core   +2 more sources

Application of GelGreen™ in Cesium Chloride Density Gradients for DNA-Stable Isotope Probing Experiments.

PLoS ONE, 2017
In this study, GelGreen™ was investigated as a replacement for SYBR® Safe to stain DNA in cesium chloride (CsCl) density gradients for DNA-stable isotope probing (SIP) experiments.
Jingfeng Gao, Kailing Pan, Hongyu Li, Xiaoyan Fan, Lixin Sun, Shujun Zhang, Yongqing Gao   +6 more
doaj   +1 more source

Borehole Waters From Hole U1601C (Atlantis Massif) Provide Constraints for a Deep‐Sourced Formation Water That (Could) Feed the Lost City Hydrothermal Field

Geochemistry, Geophysics, Geosystems, Volume 27, Issue 7, July 2026.
Abstract Hole U1601C, drilled during International Ocean Discovery Program (IODP) Expedition 399, reached a depth of 1,268 m below the seafloor (mbsf) in the Atlantis Massif (30°N, 42°W). This borehole represents only one of six boreholes that extends more than 700 m into oceanic rock, penetrating predominantly ultramafic lithologies, mostly composed ...
C. Geoffrey Wheat, Susan Q. Lang, Gordon Southam, Will Osborne, Ivan P. Savov, Samuele Agostini, Jordan Poitras   +6 more
wiley   +1 more source

Targeted metagenomics of active microbial populations with stable-isotope probing [PDF]

, 2016
The ability to explore microbial diversity and function has been enhanced by novel experimental and computational tools. The incorporation of stable isotopes into microbial biomass enables the recovery of labeled nucleic acids from active microorganisms,
Josh D Neufeld, Jennifer Pratscher, Coyotzi, Sara, Murrell, J. Colin, Neufeld, Josh D., Pratscher, Jennifer, J Colin Murrell, Sara Coyotzi   +7 more
core   +1 more source

A Nanoscale Study of Carbon and Nitrogen Fluxes in Mats of Purple Sulfur Bacteria: Implications for Carbon Cycling at the Surface of Coastal Sediments

Frontiers in Microbiology, 2017
Mass blooms of purple sulfur bacteria growing seasonally on green stranded macroalgae have a major impact on the microbial composition and functionality of intertidal mats.
Cédric Hubas, Dominique Boeuf, Dominique Boeuf, Bruno Jesus, Bruno Jesus, Najet Thiney, Yann Bozec, Yann Bozec, Christian Jeanthon, Christian Jeanthon   +9 more
doaj   +1 more source

No‐Tillage History and Residue Application Methods Regulate Net Carbon Balance via Contrasting Priming Responses in Andosols

Journal of Sustainable Agriculture and Environment, Volume 5, Issue 2, June 2026.
ABSTRACT No‐tillage (NT) is promoted as a climate‐change mitigation practice for its potential to enhance soil organic carbon (SOC) sequestration. Yet the effects of long‐term NT legacies and residue application methods on new C stabilization, priming effects (PE), and net C balance in humid Andosols remain unclear.
Daniel Asiamah Aboagye, Han Lyu, Hideaki Yasuno, Rahmatullah Hashimi, Masakazu Komatsuzaki, Haruo Tanaka, Soh Sugihara   +6 more
wiley   +1 more source

Bacteria capable of degrading anthracene, phenanthrene, and fluoranthene as revealed by DNA based stable-isotope probing in a forest soil [PDF]

, 2016
Information on microorganisms possessing the ability to metabolize different polycyclic aromatic hydrocarbons (PAHs) in complex environments helps in understanding PAHs behavior in natural environment and developing bioremediation strategies.
Luo, Chunling, Yin, Hua, Song, Mengke, Zhang, Gan, Jiang, Longfei, Yu, Zhiqiang, Zhang, Dayi, Wang, Yan   +7 more
core   +1 more source

Metabolic Regulation of Dimethylsulfoniopropionate Cleavage and Dimethyl Sulfide Production in Halomonas sp. D47

Advanced Science, Volume 13, Issue 23, 23 April 2026.
Dimethylsulfoniopropionate (DMSP) is a major marine organosulfur compound central to climate‐relevant dimethyl sulfide (DMS) production. In Halomonas sp. D47, DMSP catabolism is revealed to be coordinated by two transcriptional regulators, AcuR and AcuZ, which control gene expression by sensing DMSP and its metabolites.
Li‐Yuan Zheng, Wen‐Xin Jiang, Xiao‐Meng Sun, Li Liu, Zhao‐Jie Teng, Hou‐Qi Wang, Wen‐Jing Zhu, Chang Ge, Qi‐Long Qin, Ning‐Hua Liu, Hai‐Yan Cao, Hui‐Hui Fu, Chun‐Yang Li, Jonathan D. Todd, Xiu‐Lan Chen, Yu‐Zhong Zhang, Peng Wang   +16 more
wiley   +1 more source

Targeted Metatranscriptomics of Soil Microbial Communities with Stable Isotope Probing

, 2019
Metatranscriptomics is a powerful tool for capturing gene expression patterns in microbial communities and investigating their responses to environmental conditions.
Lu, Yahai, Yahai Lu, Dumont, Marc, Dumont, M., Lu, Y., Hernández, Marcela, Marcela Hernández García, Hu, Ang, Ang Hu, Garcia, M., Marc G. Dumont, Hu, A.   +11 more
core   +1 more source