Results 21 to 30 of about 2,462,103 (310)
Indels, structural variation, and recombination drive genomic diversity inPlasmodium falciparum [PDF]
, 2016 The malaria parasite Plasmodium falciparum has a great capacity for evolutionary adaptation to evade host immunity and develop drug resistance. Current understanding of parasite evolution is impeded by the fact that a large fraction of the genome is ...
Campino, Susana +21 more
core +3 more sources
Guangxi Zhiwu, 2023 Rhododendron capitatum and R. przewalskii are ornamental flowers and medicinal plants. The chloroplast genomes of R. capitatum and R. przewalskii have been sequenced using Illumina HiSeq 4000 platform to explore the genetic structure and evolution ...
Shouning JIA +4 more
doaj +1 more source
Structural variation in the chicken genome identified by paired-end next-generation DNA sequencing of reduced representation libraries [PDF]
, 2011 Background Variation within individual genomes ranges from single nucleotide polymorphisms (SNPs) to kilobase, and even megabase, sized structural variants (SVs), such as deletions, insertions, inversions, and more complex rearrangements.
Kerstens, H.H.D. +5 more
core +3 more sources
QUANTIFYING PHYLOGENETICALLY STRUCTURED ENVIRONMENTAL VARIATION [PDF]
Evolution, 2003 Comparative analysis methods control for the variation linked to phylogeny before attempting to correlate the remaining variation of a trait to present-day conditions (i.e., ecology and/or environment). A portion of the phylogenetic variation of the trait may be related to ecology, however; this portion is called "phylogenetic niche conservatism." We ...
Yves, Desdevises +3 more
openaire +2 more sources
Evolutionary Applications, 2022 Structural variations (SVs) are important DNA polymorphisms that contribute to genetic diversity and evolution in humans, animals, and plants. In this study, we present a novel swine SV dataset of 79,919 deletions, 23,638 duplications, and 9333 ...
Huanfa Gong +10 more
doaj +1 more source
A function space framework for structural total variation regularization with applications in inverse problems [PDF]
, 2017 In this work, we introduce a function space setting for a wide class of structural/weighted total variation (TV) regularization methods motivated by their applications in inverse problems.
Hintermüller, Michael +2 more
core +4 more sources
SIns: A Novel Insertion Detection Approach Based on Soft-Clipped Reads
Frontiers in Genetics, 2021 As a common type of structural variation, an insertion refers to the addition of a DNA sequence into an individual genome and is usually associated with some inherited diseases.
Chaokun Yan +5 more
doaj +1 more source
Visualizing Population Structure with Variational Autoencoders [PDF]
G3 Genes|Genomes|Genetics, 2020 AbstractDimensionality reduction is a common tool for visualization and inference of population structure from genotypes, but popular methods either return too many dimensions for easy plotting (PCA) or fail to preserve global geometry (t-SNE and UMAP).
C J Battey +2 more
openaire +4 more sources
Structural Data Recognition with Graph Model Boosting [PDF]
, 2017 This paper presents a novel method for structural data recognition using a large number of graph models. In general, prevalent methods for structural data recognition have two shortcomings: 1) Only a single model is used to capture structural variation ...
Miyazaki, Tomo, Omachi, Shinichiro
core +3 more sources
Optimization of $Al/AlO_x/Al$-Layer Systems for Josephson Junctions from a Microstructure Point of View [PDF]
, 2019 $Al/AlO_x/Al$-layer systems are frequently used for Josephson junction-based superconducting devices. Although much work has been devoted to the optimization of the superconducting properties of these devices, systematic studies on influence of ...
Fritz, S. +4 more
core +2 more sources