Results 11 to 20 of about 5,946,777 (312)

Prediction of structural variation [Elektronisk resurs]

Current Opinion in Structural Biology
Proteins are dynamic molecules that transition between conformational states to perform their functions, and characterizing the protein ensemble is important for understanding biology and therapeutic applications.
Sanjeev, Airy,, Wallner, Björn,, Sanjeev, Airy, Wallner, Björn, Kalakoti, Yogesh,, Kalakoti, Yogesh   +5 more
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Structure Tensor Total Variation [PDF]

SIAM Journal on Imaging Sciences, 2015
Summary: We introduce a novel generic energy functional that we employ to solve inverse imaging problems within a variational framework. The proposed regularization family, termed as structure tensor total variation (STV), penalizes the eigenvalues of the structure tensor and is suitable for both grayscale and vector-valued images.
Stamatios Lefkimmiatis, Anastasios Roussos, Petros Maragos, Michael Unser   +3 more
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Structural variations in papaya genomes [PDF]

BMC Genomics, 2021
Abstract Background Structural variations (SVs) are a type of mutations that have not been widely detected in plant genomes and studies in animals have shown their role in the process of domestication. An in-depth study of SVs will help us to further understand the impact of SVs on the phenotype and environmental ...
Zhenyang Liao, Xunxiao Zhang, Shengcheng Zhang, Zhicong Lin, Xingtan Zhang, Ray Ming   +5 more
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Automatic structured variational inference [PDF]

CoRR, 2020
Contains fulltext : 233662.pdf (Publisher’s version ) (Open Access)
Ambrogioni, L., Lin, K., Fertig, E., Vikram, S., Hinne, M., Moore, D., Gerven, M.A.J. van   +6 more
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Fully phased human genome assembly without parental data using single-cell strand sequencing and long reads [PDF]

, 2021
Human genomes are typically assembled as consensus sequences that lack information on parental haplotypes. Here we describe a reference-free workflow for diploid de novo genome assembly that combines the chromosome-wide phasing and scaffolding ...
Sorensen, Melanie, Ebler, Jana, Marijon, P., Ebert, Peter, Sanders, A.D., Pierre Marijon, Mitchell R. Vollger, Korbel, J., Marijon, Pierre, Paten, B., Harvey, W.T., Melanie Sorensen, Benedict Paten, Ashley D. Sanders, Marschall, T., Sulovari, A., Haukness, Marina, Lee, Charles, Maryam Ghareghani, Audano, P., Peter A. Audano, Scott E. Devine, Structural Variation Consortium, Human Genome, Ebert, P., Marschall, Tobias, Paten, Benedict, Katherine M. Munson, Ebler, J., Harvey, W., Peter Ebert, Lansdorp, P., David Porubsky, Jan O. Korbel, Chaisson, Mark J P, Haukness, M., William T. Harvey, Eichler, E.E., Arvis Sulovari, Eichler, E., Chaisson, M.J.P., Chaisson, M., Vollger, Mitchell R, Vollger, M.R., Sanders, Ashley D, Evan E. Eichler, Ghareghani, M., Harvey, William T, Tobias Marschall, Jana Ebler, Peter M. Lansdorp, Mark J. P. Chaisson, Devine, Scott E, Lansdorp, P.M., Sanders, A., Audano, P.A., Eichler, Evan E, Porubsky, D., Sulovari, Arvis, Devine, S.E., Devine, S., Ghareghani, Maryam, Porubsky, David, Munson, K.M., Vollger, M., Sorensen, M., Audano, Peter A, Charles Lee, Lansdorp, Peter M, Munson, Katherine M, Munson, K., Korbel, J.O., Marina Haukness, Korbel, Jan O, Lee, C.   +73 more
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Symmetry and Variation of Hodge Structures [PDF]

Asian Journal of Mathematics, 2004
The main problem addressed in the paper is the Torelli problem for n-dimensional varieties of general type, more specifically for varieties with ample canonical bundle. It asks under which geometrical condition for a variety the period map for the Hodge structure of weight n is a local embedding.
Bauer , I. C., Catanese , F.
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Structural variation in the chicken genome identified by paired-end next-generation DNA sequencing of reduced representation libraries [PDF]

, 2011
Background Variation within individual genomes ranges from single nucleotide polymorphisms (SNPs) to kilobase, and even megabase, sized structural variants (SVs), such as deletions, insertions, inversions, and more complex rearrangements.
Kerstens Hindrik HD, Vereijken, A., Martien AM Groenen, Bert W Dibbits, Groenen, M.A.M., Dibbits, B.W., Kerstens, H.H.D., Dibbits Bert W, Okimoto Ron, Hindrik HD Kerstens, Richard PMA Crooijmans, Addie Vereijken, Vereijken Addie, Crooijmans, R.P.M.A., Okimoto, R., Groenen Martien AM, Crooijmans Richard PMA, Ron Okimoto   +17 more
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The population genetics of structural variation [PDF]

Nature Genetics, 2007
Population genetics is central to our understanding of human variation, and by linking medical and evolutionary themes, it enables us to understand the origins and impacts of our genomic differences. Despite current limitations in our knowledge of the locations, sizes and mutational origins of structural variants, our characterization of their ...
Donald F, Conrad, Matthew E, Hurles
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VARIATIONS IN THE STRUCTURE OF MITOCHONDRIA [PDF]

The Journal of Cell Biology, 1956
A characteristic internal structure, consisting of a double-layered outer wall enclosing a matrix-filled space through which pass double-layered membranous folds, would appear to comprise as satisfactory a definition of mitochondria for electron microscopy as their intravital affinity for Janus green affords for light microscopy.
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A re-sequencing based assessment of genomic heterogeneity and fast neutron-induced deletions in a common bean cultivar

Frontiers in Plant Science, 2013
A small fast neutron mutant population has been established from Phaseolus vulgaris cv. Red Hawk. We leveraged the available P. vulgaris genome sequence and high throughput next generation DNA sequencing to examine the genomic structure of five ...
Jamie A. O'Rourke, Jamie A. O'Rourke, Luis P. Iniguez, Bruna eBucciarelli, Bruna eBucciarelli, Jeffrey eRoessler, Jeremy eSchmutz, Phillip E. McClean, Scott A. Jackson, Georgina eHernandez, Michelle A. Graham, Robert M. Stupar, Carroll P. Vance, Carroll P. Vance   +13 more
doaj   +1 more source