Results 11 to 20 of about 218,280 (260)
BLINK enables ultrafast tandem mass spectrometry cosine similarity scoring
Scientific Reports, 2023 Metabolomics has a long history of using cosine similarity to match experimental tandem mass spectra to databases for compound identification. Here we introduce the Blur-and-Link (BLINK) approach for scoring cosine similarity.
Thomas V. Harwood +5 more
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Plasma free and total carnitine measured in children by tandem mass spectrometry
Brazilian Journal of Medical and Biological Research, 2002 Free and total carnitine quantification is important as a complementary test for the diagnosis of unusual metabolic diseases, including fatty acid degradation disorders.
J.H. Osorio, M. Pourfarzam
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Tandem mass spectrometry data quality assessment by self-convolution
BMC Bioinformatics, 2007 Background Many algorithms have been developed for deciphering the tandem mass spectrometry (MS) data sets. They can be essentially clustered into two classes.
Tham Wai, Choo Keng
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Water Circulation and Marine Environment in the Antarctic Traced by Speciation of 129I and 127I
Scientific Reports, 2017 Emissions of anthropogenic 129I from human nuclear activities are now detected in the surface water of the Antarctic seas. Surface seawater samples from the Drake Passage, Bellingshausen, Amundsen, and Ross Seas were analyzed for total 129I and 127I, as ...
Shan Xing +6 more
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Improved mass accuracy for tandem mass spectrometry [PDF]
Journal of the American Society for Mass Spectrometry, 2005 With the emergence of top-down proteomics, the ability to achieve high mass measurement accuracy on tandem MS/MS data will be beneficial for protein identification and characterization. (FT-ICR) Fourier transform ion cyclotron resonance mass spectrometers are the ideal instruments to perform these experiments with their ability to provide high ...
Kaiser, Nathan K. +2 more
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Sucrose gradient chromatin enrichment for quantitative proteomics analysis in budding yeast
STAR Protocols, 2021 Summary: Here, we describe a fractionation protocol optimized to quantify changes in relative abundance of the chromatin-bound proteome (chromatome) by tandem mass tag multiplexing-based tandem mass spectrometry. It has been applied to yeast cells before
Kiran Challa +2 more
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Journal of Lipid Research, 2003 Sphingolipid activator proteins (saposins A, B, C, and D) are derived from a common precursor protein (prosaposin) and specifically activate in vivo degradation of glycolipids with short carbohydrate chains.
Keiko Tadano-Aritomi +4 more
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An updated map of Trypanosoma cruzi histone post-translational modifications
Scientific Data, 2021 Measurement(s) histone_modification Technology Type(s) mass spectrometry • nanoflow liquid chromatography-tandem mass spectrometry • Data-Dependent Acquisition Sample Characteristic - Organism Trypanosoma cruzi Machine-accessible metadata file describing
Rafael Fogaça de Almeida +2 more
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Gas-Phase Fragmentation of Cyclic Oligosaccharides in Tandem Mass Spectrometry
Molecules, 2019 Modern mass spectrometry, including electrospray and MALDI, is applied for analysis and structure elucidation of carbohydrates. Cyclic oligosaccharides isolated from different sources (bacteria and plants) have been known for decades and some of them ...
Alexander O. Chizhov +2 more
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