Results 61 to 70 of about 106,785 (200)
Locating tandem repeats in weighted sequences in proteins [PDF]
, 2013 A weighted biological sequence is a string in which a set of characters may appear at each position with respective probabilities of occurrence. We attempt to locate all the tandem repeats in a weighted sequence.
Guo, Qing +5 more
core +1 more source
Tandem repeats over the edit distance [PDF]
Bioinformatics, 2007 AbstractMotivation: A tandem repeat in DNA is a sequence of two or more contiguous, approximate copies of a pattern of nucleotides. Tandem repeats occur in the genomes of both eukaryotic and prokaryotic organisms. They are important in numerous fields including disease diagnosis, mapping studies, human identity testing (DNA fingerprinting), sequence ...
Dina Sokol, Gary Benson, Justin Tojeira
openaire +2 more sources
The challenge of small-scale repeats for indel discovery
Frontiers in Bioengineering and Biotechnology, 2015 Repetitive sequences are abundant in the human genome. Different classes of repetitive DNA sequences, including simple repeats, tandem repeats, segmental duplications, interspersed repeats and other elements, collectively span more than 50% of the genome.
Giuseppe eNarzisi, Michael C Schatz
doaj +1 more source
Mutation of human short tandem repeats [PDF]
Human Molecular Genetics, 1993 A total of 20,000 parent-offspring transfers of alleles were examined through the genotyping within 40 CEPH reference families of 28 short tandem repeat polymorphisms (STRPs) located on chromosome 19. Forty-seven initial mutation events were detected in the STRPs using DNA from transformed lymphoblastoid cell lines, but less than half (39%) could be ...
J L, Weber, C, Wong
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Unexpected Properties of Short Genomic Tandem Repeats
, 2017 Length polymorphisms in genomic short tandem repeats have been implicated in a variety of diseases, most notably human neurodegenerative disorders. Expansions of tandem repeats are also associated with genomic instability in cancer. Our previous study of
Simon Kasif +3 more
core +1 more source
Computational discovery and modelling of tandem domain repeats in proteins
, 2021 Domains are functional and evolutionary units of proteins that typically fold into stable globular structures. A small subset of natural multidomain proteins contain large arrays of nearly identical domains repeated in tandem, challenging some of our ...
core +1 more source
Scientific Reports, 2018 DNA repeats constitute a large part of genomes of multicellular eucaryotes. For a longtime considered as junk DNA, their role in genome organization and tuning of gene expression is being increasingly documented.
Astrid Lancrey +2 more
doaj +1 more source
Number of tandem repeats among A. marginale strains.
, 2013 The total number of strains classified in our study were organized by the number of MSP1a tandem repeats. The percent of A. marginale strains (external numbers) containing different number of tandem repeats (internal numbers) is shown.
Katarzyna Lis (420440) +14 more
core +1 more source
LEPStr: A database for Mycobacterium leprae short tandem repeats
Informatics in Medicine Unlocked, 2020 Short tandem repeats are short arrays of nucleotide sequences, and they have vital roles in many biological processes, including modulation of transcription, enhancement of gene expression, adaptation to a particular environment, and link to autosomal ...
Partha Sarathi Mohanty +9 more
doaj +1 more source
Evaluation of MUC6 mucin tandem repeats
Biochimica et Biophysica Acta (BBA) - General Subjects, 2005 The MUC6 mucin was originally isolated from stomach mucus and is one of the major secreted mucins of the digestive tract. A full-length cDNA has not been isolated for this large molecule (greater than 15 kb) and it remains poorly studied. To circumvent the lack of reagents for investigating MUC6, we isolated a cDNA clone from a human fetal pancreatic ...
Simon Parry +8 more
openaire +3 more sources