Results 31 to 40 of about 7,548,191 (313)

Cross-Platform Analysis with Binarized Gene Expression Data

, 2009
With widespread use of microarray technology as a potential diagnostics tool, the comparison of results obtained from the use of different platforms is of interest.
Tuna, Salih, Niranjan, Mahesan
core   +2 more sources

Transcriptome Analysis Reveals Significant Differences in Gene Expression of Malignant Pheochromocytoma or Paraganglioma

International Journal of Endocrinology, 2019
Prediction of malignant behavior of pheochromocytoma (PC) or paraganglioma (PG) is of limited value. The Cancer Genome Atlas (TCGA) and the French ‘Cortico et Médullosurrénale: les Tumeurs Endocrines’ (COMETE) network in Paris (France) facilitate ...
Yong Joon Suh, Jung Ho Park, Sanchir-Erdene Bilegsaikhan, Dong Jin Lee   +3 more
doaj   +1 more source

Gene expression in chicken reveals correlation with structural genomic features and conserved patterns of transcription in the terrestrial vertebrates [PDF]

, 2010
The chicken is an important agricultural and avian-model species. A survey of gene expression in a range of different tissues will provide a benchmark for understanding expression levels under normal physiological conditions in birds.
Evert M van Schothorst, Aart Lammers, Lammers, Aart, Jack A. M. Leunissen, Neerincx, P., Jaap Keijer, Keijer, J., Jack A M Leunissen, Martien A M Groenen, Crooijmans Richard P. M. A., Neerincx Pieter B. T., Groenen Martien A. M., Richard P M A Crooijmans, van Schothorst, Evert M, Keijer, Jaap, Lammers, A., Keijer Jaap, Nie Haisheng, Pieter B. T. Neerincx, Megens, H.J.W.C., Neerincx, Pieter B T, Megens Hendrik-Jan, Schothorst, E.M., van, Pieter B T Neerincx, Martien A. M. Groenen, Nie, Haisheng, Groenen, M.A.M., Hendrik-Jan Megens, Richard P. M. A. Crooijmans, Leunissen, Jack A M, Crooijmans, Richard P M A, Groenen, Martien A M, van Schothorst Evert M., Nie, H., Megens, Hendrik-Jan, Crooijmans, R.P.M.A., Haisheng Nie, Lammers Aart, Leunissen, J.A.M., Evert M. van Schothorst, Leunissen Jack A. M.   +40 more
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Widespread sex differences in gene expression and splicing in the adult human brain. [PDF]

, 2013
There is strong evidence to show that men and women differ in terms of neurodevelopment, neurochemistry and susceptibility to neurodegenerative and neuropsychiatric disease. The molecular basis of these differences remains unclear. Progress in this field
Ramasamy, Adaikalavan, Ryten, Mina, Ramasamy, A, Smith, C, Ryten, M, Trabzuni, D, Walker, R, Smith, Colin, Smith, C; id_orcid, Trabzuni, Daniah, Imran, S, Weale, M, Hardy, John, ?, ?, Weale, Michael E, Hardy, J, North American Brain Expression Consortium, Weale, ME, Imran, Sabaena, Walker, Robert   +19 more
core   +1 more source

GeneSurfer enables transcriptome-wide exploration and annotation of gene co-expression modules in 3D spatial transcriptomics data

iScience
Summary: Gene co-expression provides crucial insights into biological functions, however, there is a lack of exploratory analysis tools for localized gene co-expression in large-scale datasets.
Chang Li, Julian Thijssen, Thomas Kroes, Ximaine van der Burg, Louise van der Weerd, Thomas Höllt, Boudewijn Lelieveldt   +6 more
doaj   +1 more source

HpeNet: Co-expression Network Database for de novo Transcriptome Assembly of Paeonia lactiflora Pall

Frontiers in Genetics, 2020
The herbaceous peony (Paeonia lactiflora Pall.) is a well-known ornamental flowering and pharmaceutical plant found in China. Its high medicinal value has long been recognized by traditional Chinese medicine (as Radix paeoniae Alba and Radix paeoniae ...
Minghao Sheng, Minghao Sheng, Jiajie She, Wenying Xu, Yan Hong, Zhen Su, Xiaodong Zhang   +6 more
doaj   +1 more source

The transcriptome of Populus in elevated CO2 reveals increased anthocyanin biosynthesis during delayed autumnal senescence [PDF]

, 2010
The delay in autumnal senescence that has occurred in recent decades has been linked to rising temperatures. Here, we suggest that increasing atmospheric CO2 may partly account for delayed autumnal senescence and for the first time, through transcriptome
Tallis, M.J., Street, N.R., Calfapietra, C., Street, N. R., DeAngelis, P., Tallis, Matthew, C. Calfapietra, Street, N., M. J. Tallis, Karnosky, D., Karnosky, D. F., De Angelis, P., Zhang, J., F. Miglietta, G. Taylor, Taylor, G., Tallis, M. J., J. Zhang, N. R. Street, P. De Angelis, Rogers, A., Y. Lin, Lin, Y., Karnosky, D.F., D. F. Karnosky, A. Rogers, Miglietta, F., D F Karnosky, N R Street, A Rogers, P De Angelis, G Taylor, Y Lin, M J Tallis, F Miglietta, C Calfapietra, J Zhang   +36 more
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Global gene expression during stringent response in Corynebacterium glutamicum in presence and absence of the rel gene encoding (p) ppGpp synthase [PDF]

, 2006
Brockmann-Gretza O, Kalinowski J. Global gene expression during stringent response in Corynebacterium glutamicum in presence and absence of the rel gene encoding (p) ppGpp synthase. BMC Genomics.
Brockmann-Gretza Olaf, Kalinowski Jörn, Kalinowski, Jörn, Brockmann-Gretza, Olaf, Olaf Brockmann-Gretza, Jörn Kalinowski   +5 more
core   +1 more source

Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii [PDF]

, 2011
Toepel J, Albaum S, Arvidsson S, et al. Construction and evaluation of a whole genome microarray of Chlamydomonas reinhardtii. BMC Genomics. 2011;12(1): 579.ABSTRACT: BACKGROUND: Chlamydomonas reinhardtii is widely accepted as a model organism regarding ...
La Russa, Marco, Goesmann, Alexander ; https://orcid.org/, Arvidsson, S., Toepel, Jörg, Goesmann, A., Samuel Arvidsson, La Russa, M., Marco la Russa, Kristin Rogge, Toepel Jörg, Rogge Kristin, Alexander Goesmann, Albaum, Stefan ; https://orcid.org/, Kruse, Olaf ; https://orcid.org/, Olaf Kruse, Jörg Toepel, Arvidsson Samuel, Rogge, K., Goesmann Alexander, Albaum Stefan P, Toepel, J., Stefan P Albaum, Kruse Olaf, la Russa Marco, Albaum, S., Rogge, Kristin, Kruse, O.   +26 more
core   +2 more sources

MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies.

PLoS Genetics, 2021
Traditional predictive models for transcriptome-wide association studies (TWAS) consider only single nucleotide polymorphisms (SNPs) local to genes of interest and perform parameter shrinkage with a regularization process.
Arjun Bhattacharya, Yun Li, Michael I Love   +2 more
doaj   +1 more source